Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., putative ATP-dependent RNA helicase RhlE from Phaeobacter inhibens DSM 17395

 Score =  281 bits (719), Expect = 3e-80
 Identities = 153/361 (42%), Positives = 223/361 (61%), Gaps = 1/361 (0%)

Query: 3   FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
           FS +GL + L+  +A+LGY  PT IQ +AIP  L G+D++  AQTGTGKTA+F +P++ +
Sbjct: 9   FSTMGLPEKLLTRIAELGYTDPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPLIAQ 68

Query: 63  LRQ-GQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
           + Q G+    K VR L+L PTRELA Q+A  ++   + T +K+  V GGV    Q  RL 
Sbjct: 69  MMQYGRKPAAKTVRGLVLAPTRELANQIAANLKGLTEGTPIKTGLVVGGVSINPQISRLS 128

Query: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
            G D+L+ATPGRL+D+  + A+     + +VLDEAD+MLD+GFI ++ KI   LP + Q 
Sbjct: 129 RGTDILIATPGRLLDILDRGALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEQRQT 188

Query: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQ 241
           +LFSAT+ +++ E+A + ++ P  I +     +   I+Q +  + K  K +LL  L+   
Sbjct: 189 MLFSATMPKQMNEIANSYLQSPVRIEVNPPGKAADKITQSVHFIAKAEKLSLLKELLGAH 248

Query: 242 QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATG 301
           + ++ L+F  TKHG  KL+  L   G  A A H  +SQ  R + L  FKSG++K LVAT 
Sbjct: 249 KDERTLVFGRTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQRERALASFKSGEVKILVATD 308

Query: 302 VAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESR 361
           VAARG+DI  +  V NY+LP   D YVHRIGRT RA   G+A++F + D    L  I+  
Sbjct: 309 VAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEMGELKAIQKT 368

Query: 362 L 362
           +
Sbjct: 369 M 369