Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., ATP-dependent RNA helicase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  265 bits (676), Expect = 2e-75
 Identities = 155/369 (42%), Positives = 222/369 (60%), Gaps = 16/369 (4%)

Query: 19  LGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRALI 78
           +GY+  T IQ QAIPVIL   DLIA AQTGTGKTAS++LP+++K+ +   +       LI
Sbjct: 3   MGYKSATPIQEQAIPVILDNHDLIACAQTGTGKTASYLLPVMDKISKAADRHNN---TLI 59

Query: 79  LVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQA---QKQRLIDGVDVLVATPGRLM 135
           L PTRELA Q+  +VE     T + SLAV+GG D  A   QK+ + +GVD+++ATPGRLM
Sbjct: 60  LAPTRELAQQIDLQVEALAYFTNISSLAVYGGGDGIAYEQQKRSMREGVDIIIATPGRLM 119

Query: 136 DLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSATLSRKVREL 195
                  +  E ++ ++LDEADRMLDMGF + I +II  LP + Q LLFSAT++ K+R +
Sbjct: 120 AHLSSGVLKLEHLQHLILDEADRMLDMGFYDDIIRIISYLPKKRQTLLFSATMAPKIRTM 179

Query: 196 AKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQQWDQALIFIETKHG 255
           A   + +P +I+I+  + ++  I Q    +    K ALL+ +    Q+  ++IF+ TK  
Sbjct: 180 AGKILHEPKQITISIAKPAEG-IDQQAYNIHDQQKQALLTDIFKSGQYKSSIIFVSTKDK 238

Query: 256 AAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRV 315
              L    +  GI AEAFHS   Q  R  +L  FK+ ++  L+ T V +RGID++ +  V
Sbjct: 239 VKALFKTFKGLGIKAEAFHSDLGQKEREDILLAFKNRRLPILIGTDVLSRGIDVEGIDLV 298

Query: 316 VNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLGHLIERRVVEGFE 375
           +NYD+P    +YVHRIGRT RA   G AI+ V+  + +    IE     LIE+ V     
Sbjct: 299 INYDVPGDPADYVHRIGRTARAATKGTAITLVNGRDKRKFDNIEK----LIEKEV----- 349

Query: 376 PKKPVPISI 384
           P+ P+P SI
Sbjct: 350 PRMPLPESI 358