Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., DEAD/DEAH box helicase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  283 bits (723), Expect = 9e-81
 Identities = 154/351 (43%), Positives = 230/351 (65%), Gaps = 7/351 (1%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           SF +  L+  ++  VA  GY   T IQ +AI  +L G+D+   A+TGTGKTA+FVLPIL 
Sbjct: 4   SFEEFKLNRQILNAVADAGYTVATPIQEKAIAPVLSGQDIFGIAETGTGKTAAFVLPILM 63

Query: 62  KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
           +L+  Q       RALIL PTRELAMQ+AE+V+ +   T L+SL +FGG+  + QK+++ 
Sbjct: 64  QLKYAQGDNP---RALILSPTRELAMQIAEQVKLFSTYTDLRSLVIFGGIGPKTQKEQIA 120

Query: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
            GVD+L+ATPGR +DLY    +  + ++ +VLDEAD+M+DMGFI SI++I++ +P + Q 
Sbjct: 121 KGVDILIATPGRFLDLYLAGDINTQSLKFLVLDEADKMMDMGFIGSIHRILEIVPRKRQN 180

Query: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDK-DTKSALLSHLI-N 239
           LLFSAT+S  V+++A   + +P  I  +A     +N++Q L  V    TK  LL HL+ N
Sbjct: 181 LLFSATMSDLVQKIAGDFLNNPLVIEASAQATPAANVTQALYYVPNFKTKINLLQHLLKN 240

Query: 240 EQQWDQALIFIETKHGAAKLVSQLEKR--GIHAEAFHSGRSQAIRAQLLEDFKSGKIKYL 297
           ++ +++ +IF +TK  A  + S +E+R    H    H+ + Q  R   +  FK G ++ L
Sbjct: 241 DEAFNRLIIFCKTKTVADNIYSFIERRYGAEHVRVIHANKGQNTRINSINSFKEGNVRVL 300

Query: 298 VATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVS 348
           VAT VA+RGID+  +S V+N+D+P   ++YVHRIGRTGRA A G+AI+F +
Sbjct: 301 VATDVASRGIDVSDVSHVINFDVPIIIEDYVHRIGRTGRAFAKGDAITFAT 351