Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  318 bits (815), Expect = 2e-91
 Identities = 175/381 (45%), Positives = 243/381 (63%), Gaps = 4/381 (1%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           M F +LGL+  +++ V ++GY + T IQ QAIP++LQG+DL A AQTGTGKTA+F LP++
Sbjct: 1   MRFDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLI 60

Query: 61  EKLRQGQTQR----KKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQ 116
           ++L    T      K  VRAL+L PTRELA+QV E V+ Y K T  +S+ +FGGVD + Q
Sbjct: 61  QRLLHLDTASPSPAKHPVRALMLAPTRELALQVYESVKSYTKYTHFRSICLFGGVDIKPQ 120

Query: 117 KQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLP 176
              +  GV+ +VATPGRL+D   Q++V F +++ +VLDEADRMLDMGFI  I +I++ LP
Sbjct: 121 IAEMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNMLP 180

Query: 177 SEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSH 236
              Q LLFSAT S +++ LA T ++ P  + +A        I+  +  V +  K  LL  
Sbjct: 181 KTRQSLLFSATFSNEIQRLADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLIK 240

Query: 237 LINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKY 296
           L+   +  Q L+F+ TK G  +L  +LE+ GI A++ H  +SQ  R + L+ FK+G  K 
Sbjct: 241 LLRSGEITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCKV 300

Query: 297 LVATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLC 356
           LVAT VAARG+DID L  V+N++LP   ++YVHRIGRTGRA   G AIS V       L 
Sbjct: 301 LVATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYLA 360

Query: 357 MIESRLGHLIERRVVEGFEPK 377
            IE  +   IE+  V GFEP+
Sbjct: 361 DIEKLIKMQIEQVAVAGFEPE 381