Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  354 bits (908), Expect = e-102
 Identities = 188/382 (49%), Positives = 247/382 (64%), Gaps = 1/382 (0%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           M+F+ L L   L++ +  LGYQ PT +Q +AIP +L G DL+AAAQTGTGKTASF LP+L
Sbjct: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60

Query: 61  EKLRQG-QTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQR 119
           ++L    +       RALILVPTRELA QV +    YG+   L+S AV+GGV    Q  +
Sbjct: 61  QRLAHDPEPTASNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMMK 120

Query: 120 LIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEV 179
           L  GVD+LVATPGRL+DL+ Q AV F+++  +VLDEADRMLD+GF   +N +   LP + 
Sbjct: 121 LRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQR 180

Query: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLIN 239
           Q LLFSAT S  +R +A   ++ P  I  A   A+   I QW++ VDK  KSAL  HL  
Sbjct: 181 QTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLYK 240

Query: 240 EQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVA 299
            ++WDQ L+F++T+ G  +LV  L  +GI AE+ H  + Q  R + LE FK+G+++ LVA
Sbjct: 241 HKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLVA 300

Query: 300 TGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIE 359
           T VA+RG+DID L RVVN+DLP   ++YVHRIGRT RA A GEA+S V  D    L  IE
Sbjct: 301 TDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAIE 360

Query: 360 SRLGHLIERRVVEGFEPKKPVP 381
             +G  + R    GFEP   VP
Sbjct: 361 VLIGQPLSRIEQHGFEPDHRVP 382