Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., ATP-dependent RNA helicase RhlE from Enterobacter sp. TBS_079

 Score =  362 bits (928), Expect = e-104
 Identities = 195/377 (51%), Positives = 250/377 (66%), Gaps = 2/377 (0%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           MSF  LGL+  +++ +A+ GY +PT IQ QAIP +LQGRDL+A+AQTGTGKTA F LP+L
Sbjct: 1   MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  EKLRQGQTQRKKR--VRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQ 118
           E L + Q   K R  VRALIL PTRELA Q+ E V +Y +   ++SL VFGGV    Q  
Sbjct: 61  ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM 120

Query: 119 RLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSE 178
           +L  GVDVLVATPGRL+DL  Q A+  + IE++VLDEADRMLDMGFI  I +++  LP  
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPPR 180

Query: 179 VQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLI 238
            Q LLFSAT S +++ LA+  + +P E+ +A    +   I+Q +  VDK  K  LLSH+I
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKRELLSHMI 240

Query: 239 NEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLV 298
            +  W Q L+F  TKHGA  L  QL K GI + A H  +SQ  R + L +FKSG I+ LV
Sbjct: 241 GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRVLV 300

Query: 299 ATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMI 358
           AT +AARG+DI++L  VVNY+LP   ++YVHRIGRTGRA A GEA+S V  D  K L  I
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360

Query: 359 ESRLGHLIERRVVEGFE 375
           E  L   I R    G++
Sbjct: 361 ERLLRKEIPRIETPGYD 377