Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., DEAD/DEAH box helicase from Burkholderia phytofirmans PsJN

 Score =  350 bits (898), Expect = e-101
 Identities = 184/382 (48%), Positives = 244/382 (63%), Gaps = 1/382 (0%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           MSF+ LGL D L++ +  L YQ PT +Q +AIP +L G D++AAAQTGTGKTA F LP+L
Sbjct: 1   MSFASLGLIDPLLRNLQDLNYQTPTPVQVKAIPAVLSGNDVMAAAQTGTGKTAGFALPLL 60

Query: 61  EKLRQ-GQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQR 119
           ++L Q G      R R L+LVPTRELA QV +    YGK   L+ LA +GGV    Q  +
Sbjct: 61  QRLVQHGPEVSSNRARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSINPQMMK 120

Query: 120 LIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEV 179
           L  GVDVLVATPGRL+DL  Q AV F++++ +VLDEADRMLD+GF   +N +   LP++ 
Sbjct: 121 LRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFERELNAVFAALPAQR 180

Query: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLIN 239
           Q LLFSAT +  +R +A   +R P  IS++   A+ S I QW++ VDK  K  L  HL+ 
Sbjct: 181 QTLLFSATFTDDIRTMAAGILRGPVNISVSPPNATASRIKQWVVPVDKKNKPDLFMHLVA 240

Query: 240 EQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVA 299
           E  W+ AL+F++T++G   L + L+K G   +  H  + Q  R + LE FK+G++  LVA
Sbjct: 241 ENNWEHALVFVKTRNGVDYLAAILDKAGYSVDTIHGDKPQPARLRALERFKTGEVSMLVA 300

Query: 300 TGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIE 359
           T VAARG+DID L  V+N DLP  A +YVHRIGRTGRA A G A+S V  D    L  IE
Sbjct: 301 TDVAARGLDIDNLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE 360

Query: 360 SRLGHLIERRVVEGFEPKKPVP 381
           + +   + R    GFE +  VP
Sbjct: 361 ALIRQTLRREEEPGFEAEHRVP 382