Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., DEAD/DEAH box helicase from Burkholderia phytofirmans PsJN

 Score =  329 bits (843), Expect = 1e-94
 Identities = 177/362 (48%), Positives = 247/362 (68%), Gaps = 4/362 (1%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           +F Q GL+  +++ V + GY  PT IQ QAIPV+L GRD++ AAQTGTGKTASF LPI++
Sbjct: 12  TFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQ 71

Query: 62  KLR-QGQTQR---KKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQK 117
           +L  Q  T     +  VRALIL PTRELA QVA  V+ Y K T L+S  VFGGVD   Q 
Sbjct: 72  RLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQS 131

Query: 118 QRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177
           ++L  GV++L+ATPGRL+D   Q+     +++++VLDEADRMLDMGF+  + +I++ LP 
Sbjct: 132 EQLRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191

Query: 178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHL 237
           E Q LLFSAT S ++++LA T +R+P  I +A + ++ +N++Q +  V +  K+  +  L
Sbjct: 192 ERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEGDKTGAVVQL 251

Query: 238 INEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYL 297
           I E+   Q ++F  +K GA++L   LE+ G+ A A H  R+Q  R Q L+ FK G+I+ L
Sbjct: 252 IRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQALDAFKRGEIEAL 311

Query: 298 VATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCM 357
           VAT VAARG+DI +L  V+N+DLPF A++YVHRIGRTGRA A G+A+S  S +  K L  
Sbjct: 312 VATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLAD 371

Query: 358 IE 359
           IE
Sbjct: 372 IE 373