Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  400 bits (1029), Expect = e-116
 Identities = 210/386 (54%), Positives = 270/386 (69%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           MSFS LGLS  + + V + GY  P+ IQ QAIP +L G+D++AAAQTGTGKTA F LP+L
Sbjct: 1   MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60

Query: 61  EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
           E L +G   +  ++RAL+L PTRELA QV+E VE YGK   L+S  VFGGV    Q Q+L
Sbjct: 61  ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120

Query: 121 IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQ 180
             GVDVLVATPGRL+DL  Q+AV F ++E++VLDEADRMLDMGFI  I KI+  LP++ Q
Sbjct: 121 RHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQ 180

Query: 181 FLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE 240
            L+FSAT S ++RELAK  V  P EIS+    A+ + + QW+  VDK+ KSALL  LI +
Sbjct: 181 NLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQ 240

Query: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
           + W Q L+F  TKHGA +L   L +  I A A H  +SQ  R + L DFKSG+++ LVAT
Sbjct: 241 EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300

Query: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES 360
            +AARG+DIDQL +VVN+DLP   ++YVHRIGRTGRA A+G+A+S VS +  K L  IE 
Sbjct: 301 DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIER 360

Query: 361 RLGHLIERRVVEGFEPKKPVPISILN 386
            +  ++ER+ VEGF P   +P S LN
Sbjct: 361 LINRVLERQEVEGFSPVHTLPESTLN 386