Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (289), Expect = 3e-30
 Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 25/195 (12%)

Query: 264 AHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQRI 323
           A      SQ AQQ+S      A+ G + ++   T    +T  + G++A +T L+ Q+Q I
Sbjct: 316 ARNATSTSQAAQQSSLS----ADLGNQRVNETLTAMQNLTGLVEGSSAQVTALAGQAQDI 371

Query: 324 TQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQATSEIDNIV 383
           ++++  I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA  T  +T E++ ++
Sbjct: 372 SKVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQTSTQEVEQMI 431

Query: 384 KR---------------------NSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQ 422
                                    +  E +G+++ QI   V E N+   Q  +  EQ  
Sbjct: 432 SAIQAGSSATVESMHKSTQEVHVTRKTAEDAGESLRQITDSVLEINNRNLQIAAASEQQA 491

Query: 423 HAAENVQKTVSNIVD 437
           H A +V +++ +I D
Sbjct: 492 HVARDVDRSLVSIRD 506



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 33/192 (17%)

Query: 254 ASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALM 313
           A D+T Q L    + EAS++    +  +  +  +  E+  A+A +++   E  +   +  
Sbjct: 230 AGDLTRQ-LSVSGSDEASRLMTALNTMSGNLRTTIHEISGASAQLSTAAVEMTSITESAD 288

Query: 314 TDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTS 373
             L  Q+  I Q  T +N+         ++AA+E                EV   A++TS
Sbjct: 289 RTLQQQNSEIEQAATAVNE---------MSAAVE----------------EVARNATSTS 323

Query: 374 QATSEIDNIVKRNSQLTEQSGQTMEQI-------QAKVTEFNHMLQQTQSLIEQIQHAAE 426
           QA  +        +Q   ++   M+ +        A+VT      Q    ++  I+  AE
Sbjct: 324 QAAQQSSLSADLGNQRVNETLTAMQNLTGLVEGSSAQVTALAGQAQDISKVLGVIRGIAE 383

Query: 427 NVQKTVSNIVDE 438
                  N   E
Sbjct: 384 QTNLLALNAAIE 395