Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  114 bits (285), Expect = 7e-30
 Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 6/194 (3%)

Query: 242 NDAGVVTQVVKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASG 301
           N   V+   V   SD    +  +    +AS       A++   +   R+ +D   T+A+ 
Sbjct: 283 NQIDVIAHAVGNVSDAVRLI--SDNANDASAAVSDADAKSRDGSALSRKTLDEVLTLANA 340

Query: 302 ITESIAGANALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVV 361
           I  +   +  L  D    S+ I +++  I  IAEQTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 341 IERAADASGRLAED----SKSIGKVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVV 396

Query: 362 ADEVRSLASNTSQATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQI 421
           ADEVRSLAS T Q+T EI N+++R    ++ +   M   Q  VT+     QQT   + Q+
Sbjct: 397 ADEVRSLASKTQQSTEEIHNMIQRLQARSDDAVNAMSTSQTSVTQCVAFTQQTDERLGQV 456

Query: 422 QHAAENVQKTVSNI 435
           + + + + +  S I
Sbjct: 457 RQSLQQIVEISSQI 470



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 258 TDQVLKAHATKEAS-----QMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANAL 312
           +D  + A +T + S        QQT     +V +S +++++ ++ IAS  TE +     +
Sbjct: 425 SDDAVNAMSTSQTSVTQCVAFTQQTDERLGQVRQSLQQIVEISSQIASSTTEQMQAIGEI 484

Query: 313 MTDLSSQSQ----RITQIVTTINKIAEQTNLLAL 342
             +  S  Q       ++   ++++AE T L  L
Sbjct: 485 SQNALSIRQLSDDNNHELDRVVDEVAEATGLAGL 518