Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  353 bits (907), Expect = e-102
 Identities = 189/422 (44%), Positives = 275/422 (65%), Gaps = 5/422 (1%)

Query: 13  AAAQSEVEQHNHDSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKI 72
           A+ +SE++++   +  VSA   + A IEF P G I+ AN  FLS +GY  E++ G+HH+I
Sbjct: 11  ASYRSEIQRYQARAAAVSA---STAMIEFLPDGTIVTANDNFLSLVGYRLEDIQGKHHRI 67

Query: 73  FCDPETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIK 132
           FC PE  NS EY  FW+SLA G+     F RL +DG ++W+ A+Y P+RN  G V  V+K
Sbjct: 68  FCTPEYANSHEYKAFWRSLAAGEHASGRFLRLGRDGKNLWLGASYNPIRNEEGKVVSVLK 127

Query: 133 VAHDVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHH 192
           +A DVT+     ++Q ++ +++DRS A+I+F  DG +  ANENFL  TGYRL+EI GKHH
Sbjct: 128 LAADVTEIVEIENEQQSMINAIDRSMAVIEFTTDGEVIRANENFLAVTGYRLDEIKGKHH 187

Query: 193 RMFCDDRFY--KENPNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQV 250
           R+FC   +   +E  +FW  L +GEF +G F R+ + G+ +WL ATYNP+++  G + ++
Sbjct: 188 RLFCAPEYAASQEYKHFWSRLNQGEFFTGRFQRQDKLGRTIWLSATYNPVYDARGELYKI 247

Query: 251 VKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGAN 310
           VKFA+D+T++V +  A   A+ +A   +  T   A SG +++ +   +  GI E I  A 
Sbjct: 248 VKFANDITERVNQQQAESAAAVLAYDIALTTDANARSGAQVVQSTVEVVRGIAEEINLAA 307

Query: 311 ALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLAS 370
             + D+S+QS++I  IV TI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA+
Sbjct: 308 RGIEDVSNQSEKIGNIVQTIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAA 367

Query: 371 NTSQATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENVQK 430
            T+ AT EI ++V++N  L++ +   MEQ + KV +   +  +    IEQI+  A+ V  
Sbjct: 368 RTANATVEIVDVVRQNQVLSQAAVANMEQSKHKVEQGVALAVEAGEAIEQIREGAQQVVA 427

Query: 431 TV 432
            V
Sbjct: 428 AV 429