Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  256 bits (655), Expect = 9e-73
 Identities = 159/445 (35%), Positives = 238/445 (53%), Gaps = 38/445 (8%)

Query: 29  VSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQFW 88
           ++AL  ++A IEFD  G IL AN  FL+ MGY  +EV G+ H +F +P   +S EY  FW
Sbjct: 14  LTALSTSMALIEFDLDGTILAANTNFLTVMGYRLDEVRGKKHSLFVEPAERDSAEYRAFW 73

Query: 89  KSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITADKQA 148
             L +G    + F R+ K G  IW+EA+Y P+    G    V+K+A D+T+ K  A +  
Sbjct: 74  DQLRRGTFLAREFKRVGKGGKEIWLEASYNPILGLGGKPTGVLKIATDITRKKAEAVELQ 133

Query: 149 AVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFC--DDRFYKENPN 206
               ++ RS A+I+F  DGTI  ANENFLK  GYRLE+I GK+H +F    +R   E   
Sbjct: 134 EKVAAISRSQAVIEFAMDGTILTANENFLKTMGYRLEDIQGKNHSLFIAPGERDSAEYRQ 193

Query: 207 FWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVT-------- 258
           FW  L RGEF++  F R  + G+ +WLEA+YNPI N  G   +VVKFA+D++        
Sbjct: 194 FWDILRRGEFQARQFMRIGKGGRVVWLEASYNPILNLDGKPYKVVKFATDISGRKEENAA 253

Query: 259 -----DQVLKAHATKEASQ-------------MAQQTSAETVRVAESGREMIDAAATIAS 300
                +  +KA     AS               A+QTS ++  V+ +  E+  + + IA 
Sbjct: 254 LAKQFETGVKATVETVASSAGKMQNTAQAMAAAAEQTSQQSSIVSTAAEELGTSVSEIAR 313

Query: 301 GITESIAGANALMTDLSSQSQRITQIVTTINK----------IAEQTNLLALNAAIEAAR 350
            I ++    +  + +  +  + + ++VT  +K          IA QTNLLALNA IEAAR
Sbjct: 314 QIAQATRVTDDAVAETKASEKLVGELVTAADKIGAVSQLIADIASQTNLLALNATIEAAR 373

Query: 351 AGEYGRGFAVVADEVRSLASNTSQATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHM 410
           AG+ G+GFAVVA EV+SLA+ T++AT EI+  V      +  +   + QI   + + + +
Sbjct: 374 AGDAGKGFAVVASEVKSLANQTAKATEEIEQQVSGIQDSSRATASAIRQIGLVIAQVSEI 433

Query: 411 LQQTQSLIEQIQHAAENVQKTVSNI 435
                   E+   A   V + ++ +
Sbjct: 434 SASISGAAEEQAAATREVSQNINGV 458