Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., chemoreceptor McpA from Phaeobacter inhibens DSM 17395

 Score =  184 bits (466), Expect = 6e-51
 Identities = 132/424 (31%), Positives = 212/424 (50%), Gaps = 57/424 (13%)

Query: 9   FWKKAAAQSEVEQHNHDSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQ 68
           F+K+ A + + E    +  I+  + R  A I+F+P G IL+ANA FL A+GY  EE+ G+
Sbjct: 2   FFKRDAKKQQAES-TMERSIMDMIDRTQAMIQFEPDGTILEANANFLGAVGYQLEEIQGK 60

Query: 69  HHKIFCDPETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVY 128
           HH +F DP+   S  Y  FW  LA G+     + R+ K G +IWI+ATY PV +  G   
Sbjct: 61  HHSMFVDPDYARSDAYKSFWADLAAGKFFTDQYPRVSKAGETIWIQATYAPVLDSEGKTV 120

Query: 129 KVIKVAHDVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIV 188
           +VIK+A D+T  +          +S++  S  ++   +G +            YR++   
Sbjct: 121 RVIKLATDITARQ----------NSVEDISKGLEALSEGDL-----------SYRVQPSD 159

Query: 189 GKHHRMFCDDRFYKENPNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVT 248
               R+ C+                  F +    + T +G    ++A  + + + A  ++
Sbjct: 160 LPDMRVLCE-----------------AFNNA---QDTLNGAVETVKAVADAVGSTASEIS 199

Query: 249 QVVKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESG----REMIDAAATIASGITE 304
           Q    +S+++ +     AT E +  A +    TVR A  G     +++  A   A    E
Sbjct: 200 Q---SSSELSHRTETQAATLEETAAAIEELTSTVRSAADGAREVEDIVSNARATAEESGE 256

Query: 305 SIAGANALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADE 364
            ++ A   M+ +   S +I+QI++ I+ IA QTNLLALNA +EAARAGE GRGFAVVA E
Sbjct: 257 VVSNAVTAMSQIEESSGKISQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASE 316

Query: 365 VRSLASNTSQATSEIDNIVKRNSQ-------LTEQSGQTMEQIQAKVTEFN-HMLQQTQS 416
           VR+LA  +S A  EI  ++  +SQ       L  ++G+ +++I   V+  + H+ Q    
Sbjct: 317 VRALAQRSSDAAGEIKQLINESSQYVGNGVKLVSRAGEELQKIIGSVSTISGHVSQIATG 376

Query: 417 LIEQ 420
             EQ
Sbjct: 377 AAEQ 380



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 5/158 (3%)

Query: 240 IFNDAGVVTQVVKFASDVTDQ--VLKAHATKEASQMAQQTSAETVRVAES---GREMIDA 294
           I   +G ++Q++    D+  Q  +L  +A  EA++  +      V  +E     +   DA
Sbjct: 268 IEESSGKISQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEVRALAQRSSDA 327

Query: 295 AATIASGITESIAGANALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEY 354
           A  I   I ES       +  +S   + + +I+ +++ I+   + +A  AA ++    E 
Sbjct: 328 AGEIKQLINESSQYVGNGVKLVSRAGEELQKIIGSVSTISGHVSQIATGAAEQSVTLVEI 387

Query: 355 GRGFAVVADEVRSLASNTSQATSEIDNIVKRNSQLTEQ 392
             G + +    +  A+   +AT+    +    ++LT Q
Sbjct: 388 NTGVSQLDQVTQHNAAMVEEATAASQTLSNDANELTRQ 425