Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor from Marinobacter adhaerens HP15

 Score =  338 bits (866), Expect = 3e-97
 Identities = 175/427 (40%), Positives = 264/427 (61%), Gaps = 19/427 (4%)

Query: 11  KKAAAQSEVEQHNHDSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHH 70
           K  A QS+V++       + A+++ + +I F P G + D N   L   GYT+E+VIGQHH
Sbjct: 18  KCQAGQSKVQR------TLDAIRQAVGFIVFSPDGIVEDVNDKLLHIFGYTREQVIGQHH 71

Query: 71  KIFCDPETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKV 130
           K+  +     S EYA+FW+SL  GQ     F RL   G  +W+E +Y PV+   G V  V
Sbjct: 72  KVLVEQSYAQSPEYAEFWESLRAGQFIHGQFPRLNASGEKVWLEGSYFPVKTETGQVINV 131

Query: 131 IKVAHDVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGK 190
           +K+A DVT A+  +  + A+  +LD   A+I+F PDGT+ +AN NFL A GY L EIVG+
Sbjct: 132 VKIAADVTDAQTQSADKEALLTALDSYMAVIKFTPDGTVLDANSNFLHAMGYELSEIVGQ 191

Query: 191 HHRMFCDDRFYKENPNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQV 250
            HR+FC D FY++NP+FWR LA GE  SG F R+   G+ +WLEATY+P++++ G ++++
Sbjct: 192 AHRIFCLDDFYRDNPDFWRRLASGESFSGRFQRKDAQGRVIWLEATYSPVYDELGRISKI 251

Query: 251 VKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGAN 310
           VKFA D+T+QV ++   +E+   A  TS +T ++A      I  A   ++ + + +AGA 
Sbjct: 252 VKFAMDITEQVRRSEVARES---AAATSEQTSQIAGQTTRAITEAVEASAHVADEVAGAL 308

Query: 311 ALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLAS 370
            L   L  Q+ +I  IV TI  +A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA+
Sbjct: 309 RLSESLGDQAAQIQGIVGTIQAVADQTNLLALNAAIEAARAGDVGRGFAVVADEVRTLAA 368

Query: 371 NTSQATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENVQK 430
            T+++ ++I ++V+ N+++     + M+          H+ Q + S  ++I   +E + +
Sbjct: 369 RTAESLAQISDVVQANNEMISDMRRRMD----------HVSQLSSSSSKRIASLSEGISE 418

Query: 431 TVSNIVD 437
               I D
Sbjct: 419 VDRGIAD 425