Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., methyl-accepting chemotaxis protein from Caulobacter crescentus NA1000

 Score =  175 bits (444), Expect = 3e-48
 Identities = 139/435 (31%), Positives = 209/435 (48%), Gaps = 72/435 (16%)

Query: 28  IVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQF 87
           IV+A++R+ A IEF+  G I+ AN  FL A+GY   E+ G+HH +F DP      EY  F
Sbjct: 23  IVAAIQRSQAVIEFNLDGSIITANDNFLRAVGYGLGEIQGRHHSLFVDPAFAAGAEYRDF 82

Query: 88  WKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITADKQ 147
           W+ L  G+     + R+ K G  IWI+ATY PV +R G + KVIK A DVT A+      
Sbjct: 83  WQRLKAGEFLTGKYKRVGKGGREIWIQATYNPVFDRHGKLAKVIKFAADVTAAE------ 136

Query: 148 AAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDDRFYKENPNF 207
                                  E  E+  +    R E+           D       N 
Sbjct: 137 ----------------------TERLESERERDAMRQEQ-----------DEIVSALANS 163

Query: 208 WRELARGEFKSGL-FHRRTRHGQDLWLEATYNPIFND------------AGVVTQVVKFA 254
            + LA+G+    +  H   RH +   L+A +N   +              G+ +  V+ A
Sbjct: 164 LQRLAQGDLTVRIDAHFDARHDR---LKADFNAAVDSLKDAMGAIAEAAGGMESGAVEIA 220

Query: 255 S---DVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGIT----ESIA 307
           S   D++ +  +  A+ E +  A      TV+ +  G +   AAA+ AS       E + 
Sbjct: 221 SASNDLSKRTEQQAASLEETAAALDEITATVKRSADGAKQASAAASSASREADRSGEVVR 280

Query: 308 GANALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRS 367
            A + M ++   S +ITQI+  I++IA QTNLLALNA +EAARAG+ GRGFAVVA EVR+
Sbjct: 281 EAVSAMGEIEKSSGQITQIIGVIDEIAFQTNLLALNAGVEAARAGDAGRGFAVVAQEVRA 340

Query: 368 LASNTSQATSEIDNI-------VKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQ 420
           LA  +++A  EI  +       V+R  +L   +GQ +  I AKV E + ++++   + E 
Sbjct: 341 LAQRSAEAAKEIKQLIASSTAQVERGVRLVGDTGQALTAIVAKVGEIDTLIRE---IAES 397

Query: 421 IQHAAENVQKTVSNI 435
            Q  A  + +  S +
Sbjct: 398 AQEQATGLNEVNSAV 412