Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  352 bits (904), Expect = e-101
 Identities = 183/401 (45%), Positives = 262/401 (65%), Gaps = 13/401 (3%)

Query: 9   FWKKAAAQSEVEQHNHDSDI---------VSALKRNLAYIEFDPQGKILDANALFLSAMG 59
           FW K  + +  + +NH S           ++A++   AYI F P+G+I++AN +FL  MG
Sbjct: 2   FWWKVKSNNR-DANNHSSGFTAAETLENELAAIRAYTAYICFTPKGEIIEANDIFLDVMG 60

Query: 60  YTKEEVIGQHHKIFCDPETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMP 119
           Y+  E++G+HH++FC  +   S EY +FW+ LA G A    F RLKK+   +++EA+Y P
Sbjct: 61  YSANEILGKHHRMFCTAQYSGSQEYQKFWQELAAGNAFTGTFQRLKKNHIPVYVEASYFP 120

Query: 120 VRNRAGDVYKVIKVAHDVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKA 179
           V+N AGDV K+IK+A+DVT +++    + A+  +LDRS A+I+F PDGT+  AN+NFL  
Sbjct: 121 VKNSAGDVVKIIKIANDVTASQLNLIAKNAILDALDRSQAVIEFLPDGTVITANQNFLDI 180

Query: 180 TGYRLEEIVGKHHRMFCDDRFYKENPNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNP 239
             YRL+EI GKHH+MFCD  FY+  P+FW+ LA GE  +G F R   H   +WLEATYNP
Sbjct: 181 MHYRLDEIQGKHHKMFCDKEFYRIRPDFWKRLAAGEHFTGRFKRIDAHNNVIWLEATYNP 240

Query: 240 IFNDAGVVTQVVKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIA 299
           I++ +  V ++VKFASD++ +V   +   +A  MA  TS +T ++  +  ++++ A   +
Sbjct: 241 IWDASNKVYKIVKFASDISHRV---NTALQAVDMAAATSEQTSQITTNAVQVLNEAVCTS 297

Query: 300 SGITESIAGANALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFA 359
             I E +  A+ +  +L  QS+ I  IV TI  IAEQTNLLALNAAIEAARAG+ GRGFA
Sbjct: 298 HQIAEQVKNASNIGGELLVQSKNINDIVITIRGIAEQTNLLALNAAIEAARAGDLGRGFA 357

Query: 360 VVADEVRSLASNTSQATSEIDNIVKRNSQLTEQSGQTMEQI 400
           VVADEVR LAS TS ATSEI N+V++N+ L +     +  I
Sbjct: 358 VVADEVRKLASRTSTATSEIANVVQQNTDLIKNIDHQLSNI 398