Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (607), Expect = 5e-67
 Identities = 166/504 (32%), Positives = 267/504 (52%), Gaps = 17/504 (3%)

Query: 65  EGAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHTISPS 124
           +G  TL+      G E  +   Q ++    +++ +N+ +   +QSR+    ++E     S
Sbjct: 159 DGTYTLKDSEGKEGAEFIEQANQVSEVSRLMLQAMNEARVRLDQSRK---GNVEGAGEGS 215

Query: 125 IRSYLANLEQ-DLDSLGREHEEFERKLNELLNELRSGRE-----VKLLVADAEQIEQLQI 178
           I      ++Q ++     +   ++  LNE+   +    E       LL  +    +QL  
Sbjct: 216 IEQAEQAMKQAEVLKTTVKDPGYQTVLNEVAGHIAGFNEQLAEYTGLLAKEKVVYQQLHE 275

Query: 179 SLDQRLIDILRKIEQA--TEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIV 236
             DQ    ++ +++QA   E   + TE ++   L  +I  SA A+L GLI  +  ++ IV
Sbjct: 276 RADQ----VVARVDQAFGAEDQAMQTELKKNSLL--IIGSSALALLVGLIAAWVITRLIV 329

Query: 237 MAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIAS 296
             +    ++A ++A G+ S   +VT  DEIGQL+ +M  M   LS IV  +      +A+
Sbjct: 330 TPLRSVIRVAQQIASGDLSATVEVTRRDEIGQLMQAMQQMGAGLSSIVSGLQAGIEQLAN 389

Query: 297 TVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARY 356
           +   L++  E     V  Q+  TEQV +AM QM  T+ +VA +AEE++ A   A +    
Sbjct: 390 SAQSLSAVTEQTNLEVSSQKEETEQVATAMNQMTATVHDVARNAEEAAQAAQTADDKVES 449

Query: 357 SCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIE 416
              V+ ++     QL  +A  +   I  L A  + I + + V++ ++EQTNLLALNAAIE
Sbjct: 450 GQQVVRQSMVRIEQLADSATSASSSIESLSAEIQNIGTVLSVIKSVAEQTNLLALNAAIE 509

Query: 417 AARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEES 476
           AARAGEQGRGFAVVADEVRALA R+QQ+T EI+ L+  L   AQ++ + I SS   ++ +
Sbjct: 510 AARAGEQGRGFAVVADEVRALAKRTQQSTEEIERLVSALRSAAQASVQQIQSSGELVKMA 569

Query: 477 FSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSA 536
            S     +  L SI  A+  +   N Q+AAA+E+QS  A+EI+ ++T IR + +   L+ 
Sbjct: 570 VSDALQTESALGSIAAAVSLIQQMNQQIAAAAEQQSSVAEEINRSVTSIRASADQSSLAM 629

Query: 537 QETAQASEELAQQAQGLKLLMGRF 560
           +  A +S ELAQ    LK ++G F
Sbjct: 630 RGNAASSIELAQLGVELKGMVGHF 653