Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  213 bits (541), Expect = 2e-59
 Identities = 159/571 (27%), Positives = 269/571 (47%), Gaps = 38/571 (6%)

Query: 1   MKWFNNLSITQKMIALVGCLLALTLMVSTYSITKMKRVAVEIEAIAHDNLPLAKLMTDMT 60
           M W N+  ++ K+I        +TL V    ++ +  ++  ++ + ++NL          
Sbjct: 15  MNWLNDAKLSTKLITSFFLCALITLAVGLLGVSGVSALSTRLQGVFNNNL---------- 64

Query: 61  VHQLEGAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHT 120
              +  A T +   +A G    Q +     Y A         K EF  S +  + + E  
Sbjct: 65  ---VSVANTSQTKTKAVG----QTRDMYRLYVATAGNAPQSMKDEFLASMKANQLASEKA 117

Query: 121 ISPSIRSYLANLEQDL-DSLGREHEEFERKLNELL-----NELRSGREVKLLVADAEQ-- 172
            +   +  LA  E+   D + R+   ++  + + L      +L +GR   LL+ D ++  
Sbjct: 118 FADYRKGNLAEDERIAGDQMARDWPVYQAMVQQYLAMMAAGDLENGRT--LLLGDLQKAY 175

Query: 173 ---IEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGF 229
              ++QL I +D     I    + AT+Q V       +  L+  I +   A +  L+LG 
Sbjct: 176 RKVMDQLTIMIDSNDRQISEDAKAATQQEVTA-----KTVLYSGIVV---AFIAALLLGM 227

Query: 230 AFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVID 289
             S+ I   IA A   A  +A+G+ ++     + DE GQL+ ++  M  SL   + ++  
Sbjct: 228 FISRLISRPIAVAVDCAQRIAQGDLTQHITSNSRDEAGQLLKALGDMQTSLKTTIQQIAS 287

Query: 290 RANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATAR 349
            ++ +AS   +L +  +   +++ +Q    +Q  +A+ +M   + EVA +A  +S A+  
Sbjct: 288 ASDQLASAAEELTAVTDDGSRALIRQNDEIQQAATAVTEMTSAVEEVARNAVSTSQASQS 347

Query: 350 AQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLL 409
               A    D         +        S  ++ +L    R I   + V+ GI+EQTNLL
Sbjct: 348 TSSQASEGRDQARSAVQAINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNLL 407

Query: 410 ALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSS 469
           ALNAAIEAARAGEQGRGFAVVADEVRALA+R+Q +T EI+ +I  + +RA SA   +  S
Sbjct: 408 ALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGKS 467

Query: 470 DRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAG 529
              + E+     A  + L+ I   + ++   N  +A ASEEQ+  A E+  N+ +I+D  
Sbjct: 468 QALVTETQDLARATGEALEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDLS 527

Query: 530 ETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
                 A +T  +S+EL+  A     L+GRF
Sbjct: 528 TQTAAGANQTNASSQELSNLALSFNSLVGRF 558