Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (583), Expect = 3e-64
 Identities = 166/547 (30%), Positives = 278/547 (50%), Gaps = 25/547 (4%)

Query: 15  ALVGCLLALTLMVSTYSITKMKRVAVEIEAIAHDNLPLAKLMTDMTVHQLEGAITLE-RV 73
           AL+G   AL L +  +++T+M ++    E IA +++P  K + + T       +TL  RV
Sbjct: 12  ALIG---ALMLALGVFALTQMSKIRTSGENIAQNSVPSIKALNEFT------QLTLRLRV 62

Query: 74  FRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHTISPSIRSYLANLE 133
                + + +   QQ  Y     +LV +  Q+   ++   E  I  +   +    L  L 
Sbjct: 63  LSYRLLVNREPDIQQKTY-----DLVEQRSQQIRAAQTTYEKLISASDERAAYDQLVQLL 117

Query: 134 QDLDSLGREHEEFERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDILRKIEQ 193
                L    +   R  N  ++ELR+    +LL       + +  ++D RL++I     +
Sbjct: 118 GQYRQLEERMKTLSR--NNQVDELRALLNTELL----SNSDAINAAID-RLVEINNLQAE 170

Query: 194 ATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGN 253
           A  +      Q+   A   ++ L   A    L+  +  +  I   IA A   A E+A+GN
Sbjct: 171 ALNKGAA---QQYSSAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGN 227

Query: 254 FSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQ 313
            ++   V   DE G+L+ +M+TM + L   +  +   A  +AS   +L S  + + + + 
Sbjct: 228 LTRPITVDGSDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLT 287

Query: 314 QQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVA 373
           QQ    EQ  +A+ +M   + EVA +A  +S A+  A  +A    D++ +T +   ++ A
Sbjct: 288 QQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSA 347

Query: 374 NAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADE 433
           + Q +  +I  L   +R I   + V+ G+++QTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 348 DVQSTAALIGNLADESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADE 407

Query: 434 VRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLA 493
           VRALA R+QQ+T EI+ +I ++    + A   + +S  + E + +    A   LD+IN A
Sbjct: 408 VRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTA 467

Query: 494 LLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGL 553
           ++E+   N  +A+A+EEQ+  A E+  N+ +IRD        A +T+ AS EL++ A  L
Sbjct: 468 IVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAASAELSRLAVDL 527

Query: 554 KLLMGRF 560
             ++GRF
Sbjct: 528 NNMVGRF 534