Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  194 bits (492), Expect = 1e-53
 Identities = 149/512 (29%), Positives = 242/512 (47%), Gaps = 29/512 (5%)

Query: 75  RAAGIESSQGKQQQNQYQAQLMELVNKFK---QEFNQSRQLLESSIEHTISPSIRSYLAN 131
           R  G  +    Q   +Y   +  L+N  +   Q F   R LL+      +     S+  N
Sbjct: 34  RGIGQVTESSTQLTKRYLPAISLLLNADRDLYQAFVAERSLLDGHANEHLKALSTSHGEN 93

Query: 132 LEQDLDSL--------GREHEEFERKLNELLNELR--SGREVKLLVADAEQIEQLQISLD 181
            +Q  D +        G E +    + N+   +    S R ++L V D +    L     
Sbjct: 94  AKQAYDRVQKYAAMQPGAEAQALVSQFNDSFGKWMQVSRRVLELSVGDPQGASALSFGDS 153

Query: 182 QRLIDILR-KIEQATEQSVLVTEQEEREAL---------WGMIYLSAFAILFGLILGFAF 231
           +RL + +R  I++  E     + +E   A+          G+I L     L G IL    
Sbjct: 154 ERLFETMRDSIDKLGELEDAASHREGDAAIENGETVGVHQGVILLVG---LLGCILVLVV 210

Query: 232 SKQIVMA-IARARKLANEMAEG--NFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVI 288
              +V++ + R      ++AEG  +   R +V + DE+GQL ++ N     L  ++ EV 
Sbjct: 211 LPLVVLSPMRRLLHRVEQIAEGGGDLKGRLEVRSADELGQLGSAFNRFLDKLQPLIAEVG 270

Query: 289 DRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATA 348
                + S    +A  A +N + +  + A  +QV++A  QM+  + EVA +A  +S A  
Sbjct: 271 RVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSAAVHEVAHNAANASGAAQ 330

Query: 349 RAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNL 408
           +A   +R   +V+  T     QL    + +   I  L   T  I + + V+ GI+EQTNL
Sbjct: 331 QASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSSIGAVLEVIRGIAEQTNL 390

Query: 409 LALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDS 468
           LALNAAIEAARAGEQGRGFAVVADEVRALA+R+Q +T +I+  I+ L      A + +  
Sbjct: 391 LALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVRIERLQSGVAKAVQAMHV 450

Query: 469 SDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDA 528
              +  +S        + L     ++ ++     Q+A+A EEQS   +EI+ N++DIRD 
Sbjct: 451 GSTKARDSVERAAGVDQVLSGTGGSIQQINDMAAQIASACEEQSSVTEEIARNISDIRDL 510

Query: 529 GETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
                 ++ ++  AS++L+  ++ L  L GRF
Sbjct: 511 SNEAAANSAQSMHASQQLSSLSRNLAELTGRF 542