Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (454), Expect = 2e-49
 Identities = 114/346 (32%), Positives = 180/346 (52%), Gaps = 6/346 (1%)

Query: 220 AILFGLILGFAFSKQIVMA--IARARKLANEMAE----GNFSKRAKVTTGDEIGQLITSM 273
           A +F L+L    + Q+++   +++   L + M      G+ S R  +   DE+GQ+  + 
Sbjct: 145 AAVFVLMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLACEDEVGQMAAAF 204

Query: 274 NTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITI 333
           N M      +V  V   A  + S   +LASS    +  +  QQ+ T+Q  +A+ +M+ T+
Sbjct: 205 NAMQAGYQRVVDTVASTARQLDSGAARLASSMNDVRHGMLGQQSETDQAATAINEMSATV 264

Query: 334 TEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIE 393
             +A  A  +   +  A   A    DV+ + +   + L +  QQ+ +MI  L   +++I 
Sbjct: 265 YHIAQHAGATRDLSKTADTLAGNGHDVVARVQQSITGLSSGVQQTAEMIQRLAEDSQKIN 324

Query: 394 SFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQ 453
             V V+  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R Q +T EI  ++ 
Sbjct: 325 GVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVS 384

Query: 454 TLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSV 513
            L    + A   +  S  + ++       A   L  I  A+ ++  +NTQ+A A+E+QS 
Sbjct: 385 ALQAGTRDAVDFMQESSLKADDCVQQAREAGDALAQITAAVAQMRESNTQIAVAAEQQSH 444

Query: 514 AADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGR 559
            A+E++  +  IRD  E  +    ++A  S ELA  A  L   +G+
Sbjct: 445 VAEEMNRAVVSIRDVTENTVRQTVDSATTSHELATLAGELSKAIGQ 490