Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  187 bits (474), Expect = 1e-51
 Identities = 120/353 (33%), Positives = 189/353 (53%), Gaps = 4/353 (1%)

Query: 208 EALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIG 267
           ++ WG    +  ++  GL +G  + ++    I R  +LA +        R    +     
Sbjct: 171 DSSWGFALAAVLSVPLGL-MGLQWQQR---GIKRLLRLAEQTTSDPLIARMYTDSRGVQA 226

Query: 268 QLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMA 327
           +L  S+ +    L   +  + D A  +     Q  + A ++   +++Q+  TEQV +A+ 
Sbjct: 227 RLEMSILSQEARLKTCLTRLQDTAEHLNDQARQSNTLAHNSSSGLERQRVETEQVATAVN 286

Query: 328 QMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEA 387
           QMA T  EVAS  + ++ AT  A        D+ G+T     +L     ++ Q + +L  
Sbjct: 287 QMAATTQEVASHVQRTADATQEANRLTSRGRDIAGETREAIERLSVVVGETGQTVTQLAK 346

Query: 388 STRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHE 447
            + +I   V V++GI++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+ ++T +
Sbjct: 347 DSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQ 406

Query: 448 IKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAA 507
           I  LI  L + A +A + +D+  RQ EE  + +  A + L  I+ A+  +T   TQ+AAA
Sbjct: 407 IHALIAKLQQTATNAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMTTQIAAA 466

Query: 508 SEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           +EEQS  A+EIS N+++I +  +     A  +A  SEEL + A     L+ RF
Sbjct: 467 TEEQSSVAEEISRNISNISELADQTSGQAHSSALLSEELTRTANTQYSLVERF 519