Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  197 bits (502), Expect = 9e-55
 Identities = 128/377 (33%), Positives = 202/377 (53%), Gaps = 8/377 (2%)

Query: 184 LIDILRKIEQATEQSVLVTEQEEREALWGMIYLS--AFAILFGLILGFAFSKQIVMAIAR 241
           L+D+  K+     ++ L  + +ER     +I LS    A + GL+L +  ++ +   I  
Sbjct: 334 LLDVPEKVLVGPAET-LKQQLDERNTAGTLIELSLGVLAAVIGLLLVWLMARSVTRPILG 392

Query: 242 ARKLANEMA--EGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVT 299
             ++  ++A  EG+ ++R      DE+GQL    N     L  I+ +V        ST  
Sbjct: 393 VARMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNRFLDKLQPIIAQVKRSVQDARSTAD 452

Query: 300 QLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCD 359
           Q ++ A      ++QQ    +QV +A  +M+ T  +VA SA +++ A   A +  R    
Sbjct: 453 QSSAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATRQGLT 512

Query: 360 VLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAAR 419
           V+ +T      L A+   +   +  L A++ +I S + V+  I+EQTNLLALNAAIEAAR
Sbjct: 513 VIDRTTASIDSLAADMSTAMTQVEGLAANSEKIGSVLEVIRAIAEQTNLLALNAAIEAAR 572

Query: 420 AGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSS 479
           AG+ GRGFAVVADEVR LA R+Q++  E + +I+ L    Q     +++S RQ + S   
Sbjct: 573 AGDAGRGFAVVADEVRNLARRTQESVEETRQVIEQLQSGTQDVVGSMNNSHRQAQGSVEH 632

Query: 480 ITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQET 539
           ++ A   L  I  A+  +T  N Q+A+A+EEQS  A+EI+ N+  IRD  E++   A E+
Sbjct: 633 VSQAVTALRQIGDAVTVITDMNLQIASAAEEQSAVAEEINSNVATIRDVTESLSGQANES 692

Query: 540 AQASE---ELAQQAQGL 553
           A+ S+    LA Q QGL
Sbjct: 693 ARVSQSLNSLANQQQGL 709