Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  182 bits (461), Expect = 4e-50
 Identities = 118/350 (33%), Positives = 185/350 (52%), Gaps = 4/350 (1%)

Query: 211 WGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLI 270
           WG    +  ++  GL LG ++ ++    + R  +LA +        +    +     +L 
Sbjct: 174 WGFALAAGLSVPLGL-LGLSWQQR---GLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLE 229

Query: 271 TSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMA 330
            S+ +    L   +  + D A  +     Q  + A  +   +++Q+  TEQV +A+ QMA
Sbjct: 230 MSILSQEARLKTCLTRLQDTAEHLNEQARQSDTLAHKSSTGLERQRVETEQVATAVNQMA 289

Query: 331 ITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTR 390
            T  EVAS  + ++ AT  A        D+ G+T     +L     ++   + +L   + 
Sbjct: 290 ATTQEVASHVQRTADATQEANRLTGRGRDIAGETRDAIQRLSVVVGETGLTVTQLAKDSD 349

Query: 391 QIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKG 450
           +I   V V++GI++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+ ++T +I  
Sbjct: 350 EIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHT 409

Query: 451 LIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEE 510
           LI  L + A +A + +++  RQ EE  + +  A + L  I+ A+  +T   TQ+AAA+EE
Sbjct: 410 LIAKLQQTASTAVQTMEAGHRQAEEGVARVLEADQALVGISEAVANITDMTTQIAAATEE 469

Query: 511 QSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           QS  A+EIS N++ I    +     AQ +A  SEEL + A     L+ RF
Sbjct: 470 QSAVAEEISRNISTIAQLADQTSEQAQNSALLSEELTKTANTQYSLVERF 519