Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  219 bits (557), Expect = 3e-61
 Identities = 154/540 (28%), Positives = 266/540 (49%), Gaps = 21/540 (3%)

Query: 23  LTLMVSTYSITKMKRVAVEIEAIAHDNLPLAKLMTDMTVHQLEGAITLERVFRAAGIESS 82
           L  ++  +++T++  +  + E +    LP  +L+  +    L    +  R+  +   E S
Sbjct: 21  LVFLLGVFALTRIAAMEGDAEKVDQRLLPTIQLLGQVNQEFLMIRASTLRLLISEPAERS 80

Query: 83  QGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHTISPSIRSYLANLEQDLDSLGRE 142
           +G            E ++  ++   Q RQ L+  I+ T   ++   LAN +Q L      
Sbjct: 81  RGA-----------ETLDGLRKTLAQERQDLDRLIQDTEGKAL---LANFDQSL----AR 122

Query: 143 HEEFERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVT 202
           +E F+R++ EL  + R    +++   +  +  +        LI + R    A     L  
Sbjct: 123 YESFQRRIVELALQNRMEEAIEITRGELNEHARSTSKAVYDLIGLNRNAANAASAHAL-- 180

Query: 203 EQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTT 262
            +    A  G++     A +  +IL    ++ IV  +A A  +A  +A G+ ++  +V  
Sbjct: 181 -EVAASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGGDLTRHFQVVG 239

Query: 263 GDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQV 322
            DE  +L++++  M +SL   +  + D +N +AS   +L    E + + + QQ    EQ 
Sbjct: 240 SDEPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQNHEIEQA 299

Query: 323 TSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMI 382
            +A+ +M   + EVA +A  +S A+  + E A++    + +T      L  +  Q+   +
Sbjct: 300 ATAVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEV 359

Query: 383 VELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQ 442
             L    R I   + V+  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVRALA R+Q
Sbjct: 360 ERLAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQ 419

Query: 443 QATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANT 502
           Q+T EI+ +I  + +    A   +  S+ +   +     AA + LD I  A+ +++  N 
Sbjct: 420 QSTQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNL 479

Query: 503 QVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRFVI 562
            +A+ASEEQ+  A E+  N+ +IRD        A +T+ AS+ELA+ A  L  L+ RF +
Sbjct: 480 VIASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLVARFQV 539