Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  191 bits (484), Expect = 7e-53
 Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 9/351 (2%)

Query: 215 YLSAFAILFGLILGFAFSKQIVMA--IARARKLANEMAE----GNFSKRAKVTTGDEIGQ 268
           Y +A A+L   +LG   + Q+++   ++    L + M      G+   R  + + DE+GQ
Sbjct: 139 YATAVAVL---MLGLLAASQLLIRFLLSHLNTLKDVMLHVERSGDLQARVPLDSRDEVGQ 195

Query: 269 LITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQ 328
           + ++ N M      +V  V   A  +    ++LA+S     K ++ QQ  T+Q  +A+ +
Sbjct: 196 MASAFNAMQGGYQRVVSTVAQAAARLDEGASRLATSMNDVHKGMRGQQGETDQAATAINE 255

Query: 329 MAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEAS 388
           M+ T+ ++A  A E+   +  A   A     V+G+ E   S L    QQ+ +MI +L A 
Sbjct: 256 MSATVHQIAEHARETRDQSQNADRLAGDGHRVVGRVEKSISSLSQGVQQTGEMIEQLAAD 315

Query: 389 TRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEI 448
           +++I   V V+  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R Q +T EI
Sbjct: 316 SQRINGVVNVIHSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKRVQDSTDEI 375

Query: 449 KGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAAS 508
             +I  L    + A + +  S  + ++       A + L++I  A+ ++  +NTQ+A A+
Sbjct: 376 TQMISGLQSMTRDAVEFMQESSLKADDCVREAHDAAQALEAIADAVAQMRESNTQIAVAA 435

Query: 509 EEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGR 559
           E+QS  A+E++ ++T IRD  E  +     +A  S ELA  +  L   +G+
Sbjct: 436 EQQSQVAEELNRSVTGIRDVTERTVEQTVSSASTSAELAALSADLSRAIGQ 486