Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  193 bits (491), Expect = 1e-53
 Identities = 124/395 (31%), Positives = 214/395 (54%), Gaps = 17/395 (4%)

Query: 167 VADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLI 226
           VA+   +  ++IS D      L+ ++Q  +++++++         G I L    ++  ++
Sbjct: 159 VAENAVMGAVRISYD------LKALDQEVDRNIMIS---------GAIQL-LLLVIGVVV 202

Query: 227 LGFAFSKQIVMAIARARKLANEMAEG-NFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVG 285
           +       I+  I   R   N MAE  + S+   +   DEIG +  + N M     H + 
Sbjct: 203 MCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDEIGAMGDAFNRMIGKFRHSLE 262

Query: 286 EVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSA 345
            V    + +     +++  AE    +V +Q++ T+ V SAM +M+ T+ EVA +A +++ 
Sbjct: 263 AVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATVQEVARNANQTAT 322

Query: 346 ATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQ 405
           A+A A   ++    V  +       L+A  +++ Q+I  +E+ +  I+  + V+ GI+EQ
Sbjct: 323 ASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASIDMVLGVINGIAEQ 382

Query: 406 TNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKM 465
           TNLLALNAAIEAARAGEQGRGFAVVADEVR LASR+Q++T EI+ +I+ L    ++A + 
Sbjct: 383 TNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIEQLQSGVRNAVQA 442

Query: 466 IDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDI 525
           +  +  +       +  A + L  I   +  +   NTQ+A A+E+QS  A+EI+ N++ I
Sbjct: 443 MKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSAVAEEINRNISTI 502

Query: 526 RDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
               +T    A +T++ S+EL + A  L  L+G+F
Sbjct: 503 SRIADTTSTDATQTSEISDELVRLATELNRLVGQF 537