Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  211 bits (536), Expect = 9e-59
 Identities = 135/434 (31%), Positives = 227/434 (52%), Gaps = 2/434 (0%)

Query: 127 SYLANLEQDLDSLGREHEEFERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLID 186
           S +++L++   + G  + E   +    L   RS   V +  A  +    ++  L  +   
Sbjct: 207 SAISHLDRFKAAFGPANREQIAQFESALRNYRSS--VDVFKATTQTAASVRKDLTTQGAT 264

Query: 187 ILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLA 246
           I++  E+     + + +++   A    I      +L G++     ++QI   +     + 
Sbjct: 265 IVKLGEELYGLQMQMGKEDTAHARSLQIGCVVLVMLLGILAAVIITRQITRPLRDTLAIV 324

Query: 247 NEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAE 306
             +A G+ +    VT  DE+G L   +  M  +L  ++  + D    IAS   +L++  E
Sbjct: 325 ERIASGDLTHTEAVTRRDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTE 384

Query: 307 SNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTET 366
                V  Q+  T+QV +AM +M+ T+ EVA +AE++S A + A + AR    V+G+   
Sbjct: 385 QTSAGVNSQKVETDQVATAMHEMSATVHEVARNAEQASVAASDADQQARDGDKVVGEAIQ 444

Query: 367 VSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRG 426
              +L A   +S   +  LE  + +I   + V++ ++EQTNLLALNAAIEAARAGE GRG
Sbjct: 445 QIERLAAEVVRSSDAMNVLEQDSDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRG 504

Query: 427 FAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQ 486
           FAVVADEVR LA R+QQ+T EI+GL+  L    +  + ++  S    + S      A   
Sbjct: 505 FAVVADEVRGLAQRTQQSTEEIEGLVAALQNGTRQVSGIMLGSRTLTDSSVELTRRAGTS 564

Query: 487 LDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEEL 546
           L+SI   +  + + N Q+AAA+E+QS  ADEIS ++ ++RD  E    +++ETA +S EL
Sbjct: 565 LESITRTVSSIQAMNQQIAAAAEQQSSVADEISRSIVNVRDVSEQTAEASEETAASSVEL 624

Query: 547 AQQAQGLKLLMGRF 560
           A+    L++++  F
Sbjct: 625 ARLGGQLQMMVSHF 638