Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  184 bits (466), Expect = 1e-50
 Identities = 120/350 (34%), Positives = 184/350 (52%), Gaps = 4/350 (1%)

Query: 211 WGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLI 270
           WG    +A ++  GL LG ++ ++      R  +LA +        +    +     +L 
Sbjct: 174 WGFALAAALSVPLGL-LGLSWQQR---GTKRLLRLAEQTTSDPLIAQMYTDSRGPQARLE 229

Query: 271 TSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMA 330
            S+ +    +   +  + D A  + S   Q  S A ++   +++Q+  TEQV +A+ QMA
Sbjct: 230 MSILSQEARMKTCLTRLQDTAEHLNSQARQSNSLANASSIGLERQRVETEQVAAAINQMA 289

Query: 331 ITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTR 390
            T  EVAS    ++ AT +A E  R   D+ G+T     +L  +  ++   +  L   + 
Sbjct: 290 ATTQEVASHVNRAADATQQANELTRRGRDIAGETREAIQRLSTSVGETGLTVTRLAKDSD 349

Query: 391 QIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKG 450
           +I   V V++GI++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+ ++T +I G
Sbjct: 350 EIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHG 409

Query: 451 LIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEE 510
           LI  L + A  A   +D+  RQ EE  + +  A + L  I+ A+  +T   TQ+A A+EE
Sbjct: 410 LIAKLQQTATDAVHTMDTGRRQAEEGVARVLEADQALVGISEAVANITDMTTQIATATEE 469

Query: 511 QSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           QS  A+EI+ N+  I    +     A+ +A  S EL   A     L+ RF
Sbjct: 470 QSAVAEEINRNIATIASLADQTSDEARRSAVLSGELTDTANSQYSLVERF 519