Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  215 bits (547), Expect = 5e-60
 Identities = 134/400 (33%), Positives = 221/400 (55%), Gaps = 21/400 (5%)

Query: 161 REVKLLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFA 220
           +++ +L   A+++ + Q++L         ++E  ++  +L++           ++L A A
Sbjct: 239 KDIGILFECADKLSENQVNL---------RVEDVSQAKMLLS-----------VWLIA-A 277

Query: 221 ILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSL 280
           ++   +  +  +  IV  +    KLA  +A+G+ +    VT  DE+GQL  SM  M  +L
Sbjct: 278 LIMSALAAWVITNLIVGPLRDTLKLAERVADGDLTHNQVVTRKDELGQLQGSMMRMTGNL 337

Query: 281 SHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSA 340
             ++G + D    IAS   QL++  E     V  Q+  T+QV +AM +M+ T+ EVA +A
Sbjct: 338 RELIGGLRDGVTQIASAAEQLSAVTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNA 397

Query: 341 EESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVE 400
           E++S A   A + AR    V+ K      +L      S+  + +L+  + +I   + V++
Sbjct: 398 EQASHAAVNASKEAREGDGVVSKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGVLDVIK 457

Query: 401 GISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQ 460
            ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA R+Q +T EI  LI  L  R  
Sbjct: 458 AVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQTSTEEIAALISGLHTRTA 517

Query: 461 SATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISH 520
               ++D+S      S      A   ++++  A+  + + N Q+AAA+EEQS  A+EI+ 
Sbjct: 518 QVATILDNSQALTANSVELTRNAGVSINNMTQAISTIETMNHQIAAAAEEQSAVAEEINR 577

Query: 521 NMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           ++ ++RD  E    +++ETA +S ELA+    L+ L+ RF
Sbjct: 578 SVLNVRDISEQTASASEETAASSVELARLGVHLQSLVSRF 617