Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  220 bits (560), Expect = 2e-61
 Identities = 127/392 (32%), Positives = 224/392 (57%)

Query: 171 EQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFA 230
           +Q EQ++  L Q+ +    + +      V+  ++E++ A+  ++ ++   +L G+   F 
Sbjct: 290 QQTEQIRNDLQQQSVATAARADDLAALQVISAKKEQQTAVVQLLSVALVVLLVGIFAAFL 349

Query: 231 FSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDR 290
            ++QI + +      A  +A+G+ +  +  T  DE+G L  +M  M  SL  ++G + + 
Sbjct: 350 ITRQITVPLNSTVIAARRIADGDLTHDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNG 409

Query: 291 ANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARA 350
              IA+   QL++ +E     V  Q+   +QV +AM +MA T+ EVA + E++S A  +A
Sbjct: 410 VTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMASTVQEVARNTEDASQAAKQA 469

Query: 351 QENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLA 410
            E A +   V+        QL    QQ  + +  L   + +I S + V++ ++EQTNLLA
Sbjct: 470 SERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLA 529

Query: 411 LNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSD 470
           LNAAIEAARAGEQGRGFAVVADEVR+LA R+Q +T EI+ LIQ L +   +A+ ++D+S 
Sbjct: 530 LNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASL 589

Query: 471 RQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGE 530
           ++ E +      A++ L  IN ++  +   + Q++AA+E+QS   +EI+ ++  +RD  +
Sbjct: 590 QRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIAD 649

Query: 531 TIMLSAQETAQASEELAQQAQGLKLLMGRFVI 562
               + +++A ++ ELA+    L+ ++ RF I
Sbjct: 650 QSASATEQSAASTVELARLGSDLQSMVARFKI 681