Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (528), Expect = 6e-58
 Identities = 129/422 (30%), Positives = 218/422 (51%)

Query: 141 REHEEFERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVL 200
           + ++++  +L+ L   L++G    ++   A  I  L   ++ ++ ++ +   +    + +
Sbjct: 118 KSYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGV 177

Query: 201 VTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKV 260
              Q     L+ +I L  F  L  L L    +K I   I  A  +A  +A  + +K  +V
Sbjct: 178 QATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEV 237

Query: 261 TTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTE 320
           +  DE G+L++++ TM Q+L   + ++ D ++ +A+   ++ +  E +   +  Q     
Sbjct: 238 SGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVN 297

Query: 321 QVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQ 380
           Q  +A+ +M+  + EVA +AE +S  + + Q       + + +T     +L +N + + +
Sbjct: 298 QAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSE 357

Query: 381 MIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASR 440
            I  L    + I   V V+  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA R
Sbjct: 358 QITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHR 417

Query: 441 SQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSA 500
           +Q +T EI+ +IQ +   +  A K + +S     ES S    A   LD I  A+  +   
Sbjct: 418 TQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINER 477

Query: 501 NTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           N  +A ASEEQ+  A E+  N+  IR+        A +TA A  E+++ A  L  L+ RF
Sbjct: 478 NILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRF 537

Query: 561 VI 562
            +
Sbjct: 538 KV 539