Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  222 bits (566), Expect = 3e-62
 Identities = 138/381 (36%), Positives = 215/381 (56%), Gaps = 8/381 (2%)

Query: 186 DILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKL 245
           DI++  E   +  +   +QE  +A    I  +  AI+ G+I     ++QI   +     +
Sbjct: 264 DIVKISEDMYKLQLDRRDQESAQARTTQITCTLLAIILGIIAAVIITRQITRPLRETLAV 323

Query: 246 ANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSA 305
            + +A G+ ++   VT  DE+G L   +  M  +L  ++G + D    IAS   +L++  
Sbjct: 324 VDRIASGDLTQTLAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVT 383

Query: 306 ESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTE 365
           E     V  Q+  T+QV +AM +M+ T+ EVA +AE++S A + A   AR    V+G+  
Sbjct: 384 EQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAI 443

Query: 366 TVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGR 425
               +L     +S   + ELE  + +I   + V++ ++EQTNLLALNAAIEAARAGE GR
Sbjct: 444 AQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGR 503

Query: 426 GFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEE-SFSSITAAK 484
           GFAVVADEVR LA R+QQ+T E    I+TLV   QS T+ + S      E + SS+T ++
Sbjct: 504 GFAVVADEVRGLAQRTQQSTVE----IETLVAALQSGTRQVSSIMLNSRELTVSSVTLSR 559

Query: 485 K---QLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQ 541
           +    L SI   +  + + N Q+AAA+EEQS  A+EIS ++ ++RD  E    +++ETA 
Sbjct: 560 QAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAA 619

Query: 542 ASEELAQQAQGLKLLMGRFVI 562
           +S ELA+    L+ ++ RF I
Sbjct: 620 SSVELARLGGQLQTMVSRFRI 640