Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  192 bits (487), Expect = 4e-53
 Identities = 127/386 (32%), Positives = 205/386 (53%), Gaps = 7/386 (1%)

Query: 180 LDQRLIDILRKIEQATEQSVLV--TEQEEREALWGMIYLSAFA-ILFGLILGFAFSKQIV 236
           +DQ    +     QA E +V    T+   +  L+  I LS FA  + GL +  A S  I 
Sbjct: 165 MDQLTTIVNSNNRQAGEAAVASDQTQNSAQRNLYIGIGLSFFAAFVMGLFISRAISTPIN 224

Query: 237 MAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIAS 296
            A+  AR++A+    G+ +        DE G ++ +++ M  +L   +G++   A+ +AS
Sbjct: 225 TAVTNARRIAS----GDLTLPIASQYHDEAGMMLVALSDMQDNLKSTIGQISSAADQLAS 280

Query: 297 TVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARY 356
              +L +  E + + + +Q    +Q  SA+ +M   + EVA +A  +S A+ +   +A  
Sbjct: 281 AAEELNAVTEESSRGLIRQNDEIQQAASAVNEMTAAVEEVARNAMSTSEASRQTSTDAAA 340

Query: 357 SCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIE 416
             D         + + A    S  M+ EL    R+I   + V+ GI+EQTNLLALNAAIE
Sbjct: 341 GRDQARDAVNAINTVSAEISSSTTMVEELAGRVREIGQVLDVIRGIAEQTNLLALNAAIE 400

Query: 417 AARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEES 476
           AARAGEQGRGFAVVADEVRALA+R+Q +T EI+ +I ++   A  A + + +S      +
Sbjct: 401 AARAGEQGRGFAVVADEVRALAARTQASTGEIETMIGSVQASADQAVRAMANSRTLTSNT 460

Query: 477 FSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSA 536
            +   A  + L+ I  ++ E+   N  +A ASEEQS  A E+  N+ +I+D        A
Sbjct: 461 QTLAQATGQSLERIAQSVAEINDRNMLIATASEEQSHVAREVDRNLVNIQDLSAQTAAGA 520

Query: 537 QETAQASEELAQQAQGLKLLMGRFVI 562
            +T+ +S+EL++ A     L+G+F +
Sbjct: 521 HQTSASSQELSRLAISFNNLVGKFKV 546