Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  226 bits (575), Expect = 3e-63
 Identities = 133/374 (35%), Positives = 212/374 (56%), Gaps = 5/374 (1%)

Query: 194 ATEQSVLVTEQEEREA-----LWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANE 248
           AT   ++  + + R+A     +  +I  +A A++ G++  +  ++QI   +    ++   
Sbjct: 265 ATSNDLITRQNKSRDADSAKSVQMIIAATALAMVLGILAAWVITRQITTPLQETLEVVER 324

Query: 249 MAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESN 308
           +A G+ S+   V   DE+G+L  ++  M  SL  +VG + D    IAS   +L++  E  
Sbjct: 325 VASGDLSRNLNVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQT 384

Query: 309 KKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVS 368
              V  Q+  T+QV +AM +M  T+ EVA +AEE+S A   A   AR    V+ +     
Sbjct: 385 SAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQI 444

Query: 369 SQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFA 428
            +L +    S + +  L+  + +I S + V++ ++EQTNLLALNAAIEAARAGE GRGFA
Sbjct: 445 ERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFA 504

Query: 429 VVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLD 488
           VVADEVR+LA R+Q++T EI+ LI  L    Q AT ++DSS      S      A   L 
Sbjct: 505 VVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLA 564

Query: 489 SINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQ 548
           +I   +  + + N Q+AAA+EEQS  A+EI+ ++ ++RD  E    +++ETA +S ELA+
Sbjct: 565 NITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELAR 624

Query: 549 QAQGLKLLMGRFVI 562
               L++L+ RF +
Sbjct: 625 LGNHLQVLVSRFTV 638