Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  206 bits (524), Expect = 2e-57
 Identities = 143/468 (30%), Positives = 240/468 (51%), Gaps = 26/468 (5%)

Query: 99  VNKFKQEFNQSRQLLESS-IEHTISPSIRSYLANLEQDLDSLGREHEEFER-KLNELLNE 156
           ++KF+Q        L+ S +   ++  IR  + + + + ++L  + +EF   K +  +  
Sbjct: 177 LDKFQQTLRSFDSTLDGSDLSPDVADEIRRLMKDYQMNFEALVNKEKEFGLGKEDGKMGA 236

Query: 157 LRSGREVKLLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYL 216
           LRS      ++  +EQ  Q                 +  E ++     EE +++     L
Sbjct: 237 LRS------VIDQSEQATQ-----------------ELRELALHEIHDEEGDSVAMATTL 273

Query: 217 SAFAILFGLILGFAFSKQIVMAIARARKLANEMAEG-NFSKRAKVTTGDEIGQLITSMNT 275
            A   +   I+ F   + I+  I    ++ + + +  N + R     GDEI ++    N 
Sbjct: 274 FAVIAVLVAIVTFMIIRAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNE 333

Query: 276 MAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITE 335
           M +S   ++ +V D  N +  +  +L+++A      V +Q   T+ V +A+ +M  TI E
Sbjct: 334 MVESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDE 393

Query: 336 VASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESF 395
           +A + E ++        NA+     + +T      L      S  ++ ELE  +  I S 
Sbjct: 394 IAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSV 453

Query: 396 VLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTL 455
           + V+ GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA R+Q++T EI G+IQTL
Sbjct: 454 LDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTL 513

Query: 456 VERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAA 515
             R +S  +++++S RQ  ES     +A   L  IN  +  +   +TQ+AAA EEQS  A
Sbjct: 514 QSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVA 573

Query: 516 DEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRFVIS 563
            E++ N+  IRD  E    +A   A+AS+++ ++A+ L+  + +F +S
Sbjct: 574 AEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRVS 621