Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  185 bits (469), Expect = 6e-51
 Identities = 122/386 (31%), Positives = 205/386 (53%), Gaps = 9/386 (2%)

Query: 185 IDILRKIEQATEQSV-LVTEQEEREALWGM-IYLSAFAILFGLILGFAFS-----KQIVM 237
           I++L  +E    +S+  +T+   + A W M + +SA A++  L+     S      + V+
Sbjct: 281 INLLYSVENVLAKSLDELTDARLQTANWHMMLMMSALAVVLFLVAMMGLSVMGYLNRSVV 340

Query: 238 AIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIAST 297
            I    + A E  E + S R  + + DE+G L  + N M      ++ +V   +  +   
Sbjct: 341 HIENQMRRARE--EFDLSTRITLDSTDELGSLGNAFNGMMNDFEAVIHQVKTNSLKVTDA 398

Query: 298 VTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYS 357
           V ++ S +   +  V Q  +  EQV SAM +M+ T++++AS+A E+++A+ +A + AR  
Sbjct: 399 VKRMESHSNQMRHDVAQGHSEAEQVASAMTEMSATVSQIASNAVEAASASGKANQEARTG 458

Query: 358 CDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEA 417
              +G T    S L +    +   I +L+   + I S + V+ GI+EQTNLLALNAAIEA
Sbjct: 459 NKEVGNTGKTISALASEIDAAAIAITKLDTDIQGIVSVLEVISGIAEQTNLLALNAAIEA 518

Query: 418 ARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESF 477
           ARAGE GRGFAVVADEVR+LA R+Q +T +I+ + + L E A+ A   +     Q + S 
Sbjct: 519 ARAGEMGRGFAVVADEVRSLAQRAQSSTTDIRTMTERLKEGARVAVDAMSRGQTQAQASV 578

Query: 478 SSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQ 537
             +  A ++L  I   +  + S N Q+AAA+ EQS  A+E++ N   I +  +     A 
Sbjct: 579 QEVNHAGEELRRIVDYVSVIDSMNEQIAAATHEQSAVAEEVNRNALRISEIYQNTHQVAD 638

Query: 538 ETAQASEELAQQAQGLKLLMGRFVIS 563
           E  + +++L      +   + +F +S
Sbjct: 639 ELGRINDDLLSAVDAMGKEVSKFSLS 664