Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  192 bits (488), Expect = 3e-53
 Identities = 118/354 (33%), Positives = 196/354 (55%), Gaps = 3/354 (0%)

Query: 210 LWGMIYLSAFAILFGLILGFAFSKQIVMA-IARARKLANEMA--EGNFSKRAKVTTGDEI 266
           L G++   A  +L  +++     K++V+  +A       ++A  +G+ ++R  V + DEI
Sbjct: 140 LLGLLAQGALILLLSMVVIVIILKKLVITPLAHVVSAMEDVASGDGDLTRRLPVESQDEI 199

Query: 267 GQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAM 326
           G+L ++ N   + +   V +V + A  +      L S + +N   VQ+Q+  TE   +A+
Sbjct: 200 GRLASAFNAFIEQIHATVTKVQETAAQLIEGAGTLGSLSGANNLRVQEQRQETEAAVTAV 259

Query: 327 AQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELE 386
           +Q++ +  EVA +A  +S A A A      S     ++  ++ QLV    +    + +L+
Sbjct: 260 SQLSASAAEVAGNALRTSEAAAEADAQVDESQRRFDQSLGLTRQLVDELSRCAISVQQLQ 319

Query: 387 ASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATH 446
             T++I+  V+V+  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LASR+QQAT 
Sbjct: 320 QETQKIDEVVVVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQQATG 379

Query: 447 EIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAA 506
           EI+ +IQ +  R      ++ +S +  ++S S     K  L S+   +  + + NT+VA 
Sbjct: 380 EIQKMIQQVQTRVNDTVTVMGASQQLSDKSLSQAEEIKSMLASVTRLVSNINAMNTEVAH 439

Query: 507 ASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           A+ EQ+   + IS ++ D+     +    +   AQ+ E L QQ + L+ L+  F
Sbjct: 440 AASEQTSVTENISRSLNDLAGISGSASADSASLAQSGERLFQQGERLRALVNSF 493