Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  219 bits (558), Expect = 2e-61
 Identities = 154/558 (27%), Positives = 282/558 (50%), Gaps = 26/558 (4%)

Query: 6   NLSITQKMIALVGCLLALTLMVSTYSITKMKRVAVEIEAIAHDNLPLAKLMTDMTVHQLE 65
           +LSI ++     G +  L + ++ +S  ++ R+    + I  ++LP  +++ D+ +  L 
Sbjct: 5   SLSIARRAFVCFGLITCLLMSLAGFSYLQIDRLRAAEQGIELNSLPSIQVIDDIQIALLH 64

Query: 66  GAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHTISPSI 125
             +   R+       SS  +   +   A++ E +           Q L+S  ++      
Sbjct: 65  ARLESIRML------SSTTRDVHDFSLAKVQEAI-----------QTLQSKTDY-----Y 102

Query: 126 RSYLANLEQDLDSLGREHEEFERKLNELLNELR---SGREVKLLVADAEQIEQLQISLDQ 182
           R++L + EQD     + +E     ++ L   +    S  +  ++ A+ +Q ++  +  +Q
Sbjct: 103 RAHLMSGEQDEIQFAKANEAMTAYIDGLRKVIAMDSSDHDQAVIFANTDQAQRATVYQEQ 162

Query: 183 RLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARA 242
             +   +   QA    V  T      ++  ++ +   A +  ++L   F+  IV  I+ +
Sbjct: 163 LTLLREQNARQAVASGVDATNVYNH-SVQVLVAVLIVAFILTIVLAVLFTNSIVSPISSS 221

Query: 243 RKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLA 302
            KLA ++A G+ +   +VT  DE  +L+ ++N M ++L H + E+   ++ +++   ++ 
Sbjct: 222 LKLAEDIAAGDLTHDLEVTGSDEASRLMHALNLMQKNLRHTILEISGASSQLSTAAVEMT 281

Query: 303 SSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLG 362
           S  ES  +++QQQ +  EQ  +A+ +M+  + EVA +A  +S A  ++   A      + 
Sbjct: 282 SITESADRTLQQQNSEIEQAATAVTEMSAAVEEVARNANSTSEAAMQSSIAADLGNQKVT 341

Query: 363 KTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGE 422
           +T T    L    + S   + EL A  + I   + V+  I+EQTNLLALNAAIEAARAGE
Sbjct: 342 ETLTAMRGLTGLVEVSSDQVKELAAQAQDISKVLSVIRAIAEQTNLLALNAAIEAARAGE 401

Query: 423 QGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITA 482
           QGRGFAVVADEVRALA R+Q +T EI+ +I T+   + +A + +  S  ++  +  +   
Sbjct: 402 QGRGFAVVADEVRALAHRTQTSTQEIEQMISTIQTGSSAAVESMQKSTSEVYSTRDTAEH 461

Query: 483 AKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQA 542
           A + L  I  ++LE+   N Q+A ASEEQ+  A ++  ++  IRD         ++T  A
Sbjct: 462 AGQSLRQIIDSVLEINDRNIQIATASEEQAHVARDVDRSLISIRDLAVQSSEGTRQTLTA 521

Query: 543 SEELAQQAQGLKLLMGRF 560
           S EL++ A  L  L+ RF
Sbjct: 522 SNELSRLAVNLNDLVLRF 539