Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas aeruginosa PA14

 Score =  198 bits (504), Expect = 4e-55
 Identities = 142/436 (32%), Positives = 230/436 (52%), Gaps = 18/436 (4%)

Query: 136 LDSLGREHEEFERKLNELLNELRSGR--EVKLLVADAE--QIEQLQISLDQRLIDILRKI 191
           LD   +  +E+      LL   R  R  E  +L+  A+  + EQ+Q +L Q LI + R+ 
Sbjct: 115 LDQFVQRQQEYLEGHAALLALSRDNRTDEASVLMGGAQLQRYEQVQRTLKQ-LIALDREA 173

Query: 192 EQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAE 251
            +A+             A+  ++ +   A+   + + +  ++ IV+ I +A   A+ +A 
Sbjct: 174 ARASTAEAADVYSRASTAILAVLLV---ALAASVTIAWLLTRSIVVPIRQAVSCADRIAA 230

Query: 252 GNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKS 311
            + +        DE  QL+ +M +M  SL   + ++ D A  +A+   QL +  E   +S
Sbjct: 231 RDLTGEIASDGDDEPAQLMKAMRSMQASLHDTIEQIGDSAALLAAAAEQLNAVTEEGNRS 290

Query: 312 VQQQQANTEQVTSAMAQMAITITEVA---SSAEESSAATARAQENARYSCDVLGKTETVS 368
           + +Q    E   +A+ +M+  + EVA   SS  E+S+ + RA  N R   +     +TV 
Sbjct: 291 LARQNDEIEMAATAVNEMSAAVEEVARNASSTAEASSLSERAAGNGRARVE-----QTVR 345

Query: 369 S--QLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRG 426
           S  Q+ A   Q+ +++  L +  + I   + V+  I+EQTNLLALNAAIEAARAGEQGRG
Sbjct: 346 SIRQMNAEIGQTARLVEGLASQAQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEQGRG 405

Query: 427 FAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQ 486
           FAVVADEVRALA R+QQ+THEI+G+I ++ E   +A   +  +D++  +      AA   
Sbjct: 406 FAVVADEVRALAHRTQQSTHEIEGMIASVREGTDTAVSAMRENDQRARQMLDEAEAADHA 465

Query: 487 LDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEEL 546
           L  I      +      +A+A+EEQ+  A E+  N+ +IRD        A++T  AS EL
Sbjct: 466 LGEIAEHATRINERTLVIASAAEEQAHVAREVDRNLVNIRDVAVQTTQGAEQTRGASHEL 525

Query: 547 AQQAQGLKLLMGRFVI 562
           ++ A  LK ++GRFV+
Sbjct: 526 SRLANDLKSMIGRFVV 541