Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas aeruginosa PA14

 Score =  200 bits (509), Expect = 1e-55
 Identities = 132/433 (30%), Positives = 222/433 (51%), Gaps = 25/433 (5%)

Query: 132 LEQDLDSLGREHEEFERKLNELLNELRSGREVKLLVADAE---QIEQLQISL-DQRLIDI 187
           ++Q L  +  EH   E  L   + +      + L +  A    +++QLQ  L DQR  DI
Sbjct: 299 IDQPLYDIDAEHGHIELFLPFTIADSGVRWTLMLQIPQAAVFGELQQLQGELSDQRQQDI 358

Query: 188 LRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLAN 247
           L                    +L G++ ++A  +L   ++G+  ++ +   +     +A 
Sbjct: 359 LGM------------------SLAGLV-VAALGLLVVWLVGYGIARPLRQLVGMLDDIAQ 399

Query: 248 EMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAES 307
              EG+ ++R      DE+G +    NT    L +++G+V+     ++ +    A  A  
Sbjct: 400 --GEGDLTRRLSSERADELGSIAKGFNTFLGKLQNMIGQVVQSVQKVSDSSEHTADIAIR 457

Query: 308 NKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETV 367
             + VQQQ A  E V +A+ +M  T  +VA +A  ++ A   A + A     ++  +   
Sbjct: 458 TNQGVQQQLAEIELVATAVHEMTATAQDVARNATHAAEAANHADQAAHQGKQIVESSSAA 517

Query: 368 SSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGF 427
              L +   ++  ++  L   +  I + ++ + GI+EQTNLLALNAAIEAARAGEQGRGF
Sbjct: 518 IQALASEIGRAVGVVQNLAKDSENINAILVAIRGIAEQTNLLALNAAIEAARAGEQGRGF 577

Query: 428 AVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQL 487
           AVVADEVR LA ++QQAT EI+ +IQ L +  +   K++  S  + ++S      A + L
Sbjct: 578 AVVADEVRNLAQKTQQATEEIQSMIQQLQQGTRDVVKVMQDSQDRTDDSVRHARQAAEAL 637

Query: 488 DSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELA 547
           +SI  A+  +   NTQ+A+A+EEQS  A++I+ N+ +I      +   A E +QAS EL 
Sbjct: 638 ESITQAVSVINDMNTQIASAAEEQSAVAEDINRNVANIGQVANQVAGGADEASQASAELT 697

Query: 548 QQAQGLKLLMGRF 560
           + A+  + L+ +F
Sbjct: 698 RLAEQQRRLVNQF 710