Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  207 bits (528), Expect = 7e-58
 Identities = 138/423 (32%), Positives = 229/423 (54%), Gaps = 14/423 (3%)

Query: 149 KLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEERE 208
           +LN L+++    +  K LV+  ++   L +  D   +  LR    + E+S++  + +  +
Sbjct: 203 ELNALIDDYE--KNFKALVSKEQE---LGLDKDSGSMASLRDSISSAEKSLVQLKAQSMD 257

Query: 209 ALWGM------IYLSAFAILFGLILGF--AFSKQIVMAIARARKLANEM-AEGNFSKRAK 259
           A+         I +  F ++  +++GF  A  + I+  + R     + + A  + + R  
Sbjct: 258 AISDAESATVTISIVVFILITLVLIGFTLAIIRSIMEPVQRISDAISRIEATKDLTLRCD 317

Query: 260 VTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANT 319
               DEIGQ+    N+M +S   ++ EV+     +  +  +L+ ++    + V +Q   T
Sbjct: 318 TKVDDEIGQIARHFNSMVESFQSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNET 377

Query: 320 EQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQ 379
           + V +A+ +M  TI E+AS+ E ++       +NA+     +  T      L A    S 
Sbjct: 378 DMVATAITEMGATIDEIASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSA 437

Query: 380 QMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAS 439
           Q++ ELE  +  I S + V+ GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA 
Sbjct: 438 QVVSELEKDSETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAM 497

Query: 440 RSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTS 499
           R+Q++T EI G+IQTL  R +S  ++++++ RQ  ES     +A   L+ IN  +  +  
Sbjct: 498 RTQESTEEIAGIIQTLQSRTRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMD 557

Query: 500 ANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGR 559
            +TQ+AAA EEQS+ A E++ N+  IRD       +A E A+AS+++  + Q L   +  
Sbjct: 558 MSTQIAAAIEEQSMVASEVNKNVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSL 617

Query: 560 FVI 562
           F I
Sbjct: 618 FKI 620