Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  200 bits (508), Expect = 2e-55
 Identities = 123/417 (29%), Positives = 229/417 (54%), Gaps = 9/417 (2%)

Query: 147 ERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEE 206
           +RK  +L   L++ + +  + ++A  + Q   SL++ +        ++T Q+V V   +E
Sbjct: 266 KRKGQQLDFNLQASQLLNTVESNATAVNQSMGSLNKAI--------ESTSQAVSVKAIDE 317

Query: 207 RE-ALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDE 265
            + A +  + L   AI+  +++  A  + +  ++ +     N +A GN + +   +  DE
Sbjct: 318 IDSASYKTLALVLIAIVVAVLVSIAVIRPLKNSLDKVNNALNILASGNLTHKLDDSGHDE 377

Query: 266 IGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSA 325
             +L  + N +  SL  ++  ++DR+N +A+   + ++        +Q+Q+   +QV +A
Sbjct: 378 FAELSRNCNRLVDSLRTLIQGILDRSNQLAAAAEETSAITAQTTAGIQEQKNQVDQVATA 437

Query: 326 MAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVEL 385
             Q++ +  +V++SA+E+     +A E A++   +  + +     L     ++ Q+I ++
Sbjct: 438 TTQLSSSAMQVSTSADEALNQIRQADEEAQHMRAIADENKRTILALADEVAKAGQVINKV 497

Query: 386 EASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQAT 445
            + +  I S + V+ GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASR+Q +T
Sbjct: 498 HSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDST 557

Query: 446 HEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVA 505
            EI+ +IQ L +  Q A  +++   +Q          A   L+SI+ A+     + T +A
Sbjct: 558 QEIQQMIQVLQQGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYAHDSGTHIA 617

Query: 506 AASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRFVI 562
            A++EQ++ + ++S  +  I    E     A +TAQ+S ++AQ A+ L+  +G F +
Sbjct: 618 NAAQEQNLVSQQVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQASVGEFKV 674