Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (480), Expect = 3e-52
 Identities = 113/355 (31%), Positives = 196/355 (55%), Gaps = 2/355 (0%)

Query: 208 EALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGN--FSKRAKVTTGDE 265
           +AL   +  SA  +L  + +       +   I   + +  E+++GN   +KR ++   D+
Sbjct: 275 QALTSALVSSAIMLLCAISILLGVLYLLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDD 334

Query: 266 IGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSA 325
           +GQ+   +N    +L  ++ EV+  +  I+ +V +L    E+N+  +      TEQ+ +A
Sbjct: 335 LGQISMGINQFIANLQAMMREVLQASAHISGSVERLNGETETNRHILSAHTKETEQIVAA 394

Query: 326 MAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVEL 385
           + +M+ T  +VA +  E+++ T    E A  S  V+ +     ++LV   + +   I ++
Sbjct: 395 VEEMSATANDVAQNGSETASFTQLTNEQALASKQVVAQATETVNRLVREVEHTADKIGQI 454

Query: 386 EASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQAT 445
           +  T  I   + V+  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVRALA+R+Q +T
Sbjct: 455 DRDTINITQVLKVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDST 514

Query: 446 HEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVA 505
            EI+  +  L + + SA   ++ + +   E+ S+       LD+I  ++ ++   NTQ+A
Sbjct: 515 AEIEETLSNLRDASNSAIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQINDLNTQIA 574

Query: 506 AASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
            A+EEQS  + EI+ NM+ I D    +  S + +   +  LA   Q L+ ++G+F
Sbjct: 575 TAAEEQSSVSAEITRNMSAICDMANELARSGESSRNETVNLATANQQLEQIVGQF 629