Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  222 bits (565), Expect = 4e-62
 Identities = 130/363 (35%), Positives = 212/363 (58%), Gaps = 2/363 (0%)

Query: 202 TEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEG--NFSKRAK 259
           +EQ   +  + +I +   A L G  + +  +K I   IA      N++AEG  + ++R +
Sbjct: 272 SEQAMSDIRFKLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIE 331

Query: 260 VTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANT 319
           V + DEI QL  + N  A+ +   V +V D  + +A++  ++++     ++  ++Q   T
Sbjct: 332 VKSKDEIAQLALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLET 391

Query: 320 EQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQ 379
           EQV +AM +MA T+ EVA +A +++ A   A E+  +   ++ K  +  S L      + 
Sbjct: 392 EQVATAMNEMAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAA 451

Query: 380 QMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAS 439
           + I ELE +T QI+S ++V+  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LAS
Sbjct: 452 KAINELERNTAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAS 511

Query: 440 RSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTS 499
           R+Q +T EI+ +I+ L   A+S    +++S    +   S +  A + L++I  A+  ++ 
Sbjct: 512 RTQASTSEIQQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQ 571

Query: 500 ANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGR 559
            N Q+A+A+ EQ   + EI+ N+ +I D       SA +TA+A +ELAQ +  L  L+ +
Sbjct: 572 MNIQIASAANEQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQ 631

Query: 560 FVI 562
           F I
Sbjct: 632 FRI 634