Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  189 bits (479), Expect = 3e-52
 Identities = 116/352 (32%), Positives = 193/352 (54%), Gaps = 8/352 (2%)

Query: 215 YLSAFAILFG-LILGFAFSKQIVMA-----IARARKLANEMAEGNFSKRAKVTTGDEIGQ 268
           +L A  IL G L++ F   K++V++     +A   ++AN   +G+ S R  V + DEIG+
Sbjct: 144 FLQALLILAGSLLVIFIILKRLVISPLDKVVAALEEIAN--GDGDLSHRLPVESEDEIGK 201

Query: 269 LITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQ 328
           L  + N   + +   +  V + +  +      L + ++SN + VQ Q   TE   +A+ Q
Sbjct: 202 LANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRVQAQLKETEAAVTAVTQ 261

Query: 329 MAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEAS 388
           ++ +  EVA +A+ ++ A  +A                ++ QL     +S Q + +L+  
Sbjct: 262 LSASANEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLAGELARSAQSVSQLQQE 321

Query: 389 TRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEI 448
           T++I+  V+V+  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASR+QQAT EI
Sbjct: 322 TQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQQATGEI 381

Query: 449 KGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAAS 508
           + +IQ +  R      ++ SS     +  +     K  L  +   +  +++ N +V+ A+
Sbjct: 382 QKMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTDLVSNISNMNIEVSHAA 441

Query: 509 EEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           +EQ+   + IS  + D+ +   +  L ++  AQ+SE L  Q + L+ L+  F
Sbjct: 442 QEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRTLVTSF 493