Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  197 bits (502), Expect = 7e-55
 Identities = 124/341 (36%), Positives = 187/341 (54%), Gaps = 2/341 (0%)

Query: 221 ILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSL 280
           IL    LG+  S+ IV  + +       +A GN + +  VT  DE+  L  ++N    S+
Sbjct: 192 ILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTGKDELAALAHNINQSMASI 251

Query: 281 SHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSA 340
              + E    A+ ++   +++AS+AE   ++V  Q+    Q+ +AM +M+ TI +VA++A
Sbjct: 252 RTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIADVANNA 311

Query: 341 EESSAATARAQENARYSC-DVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVV 399
           E ++  T  A   A     DV    + + + L    +Q+ Q + +L+    QI     V+
Sbjct: 312 ESTAKDTKEATREAGLGDKDVHASVDGIHA-LAKEVEQATQQVNKLKEEIMQISEVTAVI 370

Query: 400 EGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERA 459
             IS+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LASR++Q+T EI+  I  L +RA
Sbjct: 371 SAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQNTISLLQQRA 430

Query: 460 QSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEIS 519
            SA   +D+S    E+S    T A   L  I   +  ++   TQ+A A+EEQS  A+E++
Sbjct: 431 VSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAEEQSAVAEEMN 490

Query: 520 HNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
            N+  I  +   +  SA   AQ SE LA+ +  L   +  F
Sbjct: 491 RNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAF 531