Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  211 bits (537), Expect = 7e-59
 Identities = 147/459 (32%), Positives = 240/459 (52%), Gaps = 25/459 (5%)

Query: 105 EFNQSRQLLESSIEHTISPSIRSYLANLEQDLDSLGREHEEFERKLNELLNELRSGREVK 164
           +FN S  L  SS++      I + +   ++D  SL  + ++        L+E + G   K
Sbjct: 186 QFNTS--LRASSLDFDTQNKIAALIEQYQKDFKSLVNKEQQLG------LSE-KDGTMAK 236

Query: 165 LLVADAEQIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFG 224
           L+ A+    +  + S D+     L+ I+     SV +          G++     A++  
Sbjct: 237 LIAAN----KLTEASADELHNLALKAIDDTESSSVNI----------GILVFVIIALILA 282

Query: 225 LILGFAFSKQIVMAIARARKLANEM-AEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHI 283
           +I  +   + I+  + R  ++ + +    + + R   +T DE+G++    N+M  S   +
Sbjct: 283 VIT-YLIIRSIITPVERITQVISRIEVSKDLTLRCDASTQDELGEIAQHFNSMVGSFQQL 341

Query: 284 VGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEES 343
           + +VID   TI ++   ++ +A    + V QQ   T+ V +A+ +M  TI E+A + E +
Sbjct: 342 IEQVIDSVATINTSCKSVSENAMLASEGVAQQLNETDMVATAITEMGATIDEIAKTTELA 401

Query: 344 SAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGIS 403
           +    +  +NA+     + +T     QL      S  ++ ELE  +  I S + V+ GI+
Sbjct: 402 ALKAGKTHDNAQLGQTEVEQTILKIRQLSEQINSSASVVDELERDSETIGSVLDVIRGIA 461

Query: 404 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSAT 463
           EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA R+Q +T EI  +IQTL  R ++  
Sbjct: 462 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQTSTQEIANIIQTLQSRTRAIV 521

Query: 464 KMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMT 523
           +++D+S +Q  ES     AA + L  IN  +  +   +TQ+AAA EEQS+ A E++ N+ 
Sbjct: 522 QLMDASQKQGAESAEQAAAAGELLKLINTDVHNIMDMSTQIAAAIEEQSMVAAEVNKNVV 581

Query: 524 DIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRFVI 562
            IRD  E    +A   A AS+EL  +A+ L   +  F I
Sbjct: 582 VIRDIAEDSSRAADANASASDELKSRAEYLVSAVSHFKI 620