Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (280), Expect = 4e-29
 Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 17/293 (5%)

Query: 32  DDLRRQARTLARKQQ----AAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESS 87
           D++ R  + LA  QQ      + ++ + A+L    +E ++       S++Q     E+++
Sbjct: 243 DEVSRLLKALAAMQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAA 302

Query: 88  SATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQN 147
           +A  +  TAV ++       +    QS +  +  +Q + D  + I  + S+VQ +     
Sbjct: 303 TAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTG---- 358

Query: 148 DSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRT 207
             V+ +   S+   K+ D ++    IA+QTNLLALNAAIEA RAG+ G+GFAVVAD VR 
Sbjct: 359 GLVQSLANQSQDIGKVLDVIRA---IAEQTNLLALNAAIEAARAGESGRGFAVVADEVRA 415

Query: 208 LAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVD 267
           LA + +++   IE +++ + +GA    + +++SS +A S +         L  I   + +
Sbjct: 416 LAYRTQQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNE 475

Query: 268 LVKDSEVLLKAADEMSSAA------VIALKGSESVSQAAQEQSAACEESLKSL 314
           + + + V+  AA+E +  A      ++ ++     S +  +Q++A    L  L
Sbjct: 476 IHERNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQL 528



 Score = 88.6 bits (218), Expect = 7e-22
 Identities = 96/424 (22%), Positives = 179/424 (42%), Gaps = 52/424 (12%)

Query: 224 KDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMS 283
           K +++ AE+ S  V   SQK++      H  N ++      +V L      L   A  M 
Sbjct: 161 KQLNDLAELFSKQVSIESQKSQE-----HYANSRM------VVSLFVVFAALATVALAML 209

Query: 284 SAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQIA--LDGAVTAAQSLDELTDELRTS 341
               I     E+++ A           +++    +++  L       Q+L E      T 
Sbjct: 210 LTRSIVKPLGEALNAAENVARGDLTRPIETHGNDEVSRLLKALAAMQQNLRE------TL 263

Query: 342 TDIVKSSEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIE 401
             I  S+ ++A AA+EL+A   +  +S  +    + Q ++    M           T +E
Sbjct: 264 QGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMT----------TAVE 313

Query: 402 QGARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISR 461
           + AR     ++++ ++ E    G +    TVD  I A+    +     +  +AN    S+
Sbjct: 314 EVARNAVSTSDATRQSSESASLGQQRVSDTVDA-IGALASDVQVTGGLVQSLANQ---SQ 369

Query: 462 QIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKD 521
            I K++D I  ++ QT +LA+N A+EAARAGE G+GFAVV+ +++ LA    ++ ++I+ 
Sbjct: 370 DIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRTQQSTQEIEQ 429

Query: 522 QVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGG 581
            V+        +R      L ++   + +AA T+   +     +  +      I      
Sbjct: 430 MVQG-------MRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIH----- 477

Query: 582 IERSIADARAGMQQIATAAEESSHATG------EAATAARQQSSSTSELASAIENIAAVA 635
            ER++  A A  +Q   A E   +          +A+ A Q S+S+ EL+    ++  + 
Sbjct: 478 -ERNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMV 536

Query: 636 DELQ 639
              Q
Sbjct: 537 QRFQ 540